Variant report
| Variant | rs4957178 |
|---|---|
| Chromosome Location | chr5:41936542-41936543 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41926000-41937600 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr5:41926000-41937600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 3 | chr5:41926000-41940600 | Weak transcription | Ovary | ovary |
| 4 | chr5:41926000-41951400 | Weak transcription | Gastric | stomach |
| 5 | chr5:41926200-41936800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 6 | chr5:41926200-41937200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr5:41926200-41937400 | Weak transcription | Fetal Brain Female | brain |
| 8 | chr5:41926200-41937400 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr5:41926200-41939000 | Weak transcription | Colon Smooth Muscle | Colon |
| 10 | chr5:41926200-41940800 | Weak transcription | HSMMtube | muscle |
| 11 | chr5:41926200-41940800 | Weak transcription | NHDF-Ad | bronchial |
| 12 | chr5:41926200-41941000 | Weak transcription | NHLF | lung |
| 13 | chr5:41926200-41943200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 14 | chr5:41926200-41945000 | Weak transcription | HSMM | muscle |
| 15 | chr5:41926200-41945200 | Weak transcription | Esophagus | oesophagus |
| 16 | chr5:41926200-41945400 | Weak transcription | Fetal Lung | lung |
| 17 | chr5:41926200-41946800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 18 | chr5:41926200-41947000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 19 | chr5:41926400-41936800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr5:41926400-41937000 | Weak transcription | Osteobl | bone |
| 21 | chr5:41926400-41939400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 22 | chr5:41926400-41940600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 23 | chr5:41926400-41940600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 24 | chr5:41926400-41941600 | Weak transcription | Fetal Intestine Small | intestine |
| 25 | chr5:41926400-41942800 | Weak transcription | Thymus | Thymus |
| 26 | chr5:41926800-41946200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 27 | chr5:41927400-41940600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 28 | chr5:41928000-41937400 | Weak transcription | GM12878-XiMat | blood |
| 29 | chr5:41929600-41942800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr5:41929800-41936800 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 31 | chr5:41930000-41940600 | Weak transcription | HepG2 | liver |
| 32 | chr5:41930600-41943000 | Weak transcription | Hela-S3 | cervix |
| 33 | chr5:41931200-41937600 | Strong transcription | Primary B cells from cord blood | blood |
| 34 | chr5:41931600-41939600 | Strong transcription | Liver | Liver |
| 35 | chr5:41932000-41936600 | Strong transcription | Primary T cells from cord blood | blood |
| 36 | chr5:41932200-41937200 | Weak transcription | A549 | lung |
| 37 | chr5:41933000-41942200 | Weak transcription | Small Intestine | intestine |
| 38 | chr5:41933200-41936600 | Weak transcription | NHEK | skin |
| 39 | chr5:41933800-41937600 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 40 | chr5:41934000-41936800 | Strong transcription | Adipose Nuclei | Adipose |
| 41 | chr5:41934000-41937000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 42 | chr5:41934000-41937200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr5:41934000-41938200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 44 | chr5:41934000-41939200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr5:41934000-41939800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 46 | chr5:41934200-41936600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 47 | chr5:41934200-41936800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 48 | chr5:41934200-41937000 | Strong transcription | Dnd41 | blood |
| 49 | chr5:41934200-41937000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 50 | chr5:41934200-41938200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
