The 2.0 version of rSNPBase

Variant report

Variant rs7729014
Chromosome Location chr5:41833442-41833443
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41778200-41838200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr5:41795400-41835800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr5:41800800-41838600 Weak transcription Fetal Stomach stomach
4 chr5:41801000-41835800 Weak transcription Stomach Smooth Muscle stomach
5 chr5:41801000-41849200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr5:41801200-41849200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr5:41801200-41849200 Weak transcription Fetal Brain Male brain
8 chr5:41809800-41836200 Weak transcription Right Ventricle heart
9 chr5:41814000-41842200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr5:41816200-41838600 Weak transcription NHEK skin
11 chr5:41817000-41836000 Weak transcription Aorta Aorta
12 chr5:41818400-41852000 Weak transcription Small Intestine intestine
13 chr5:41819200-41852800 Weak transcription Pancreas Pancrea
14 chr5:41822600-41836000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr5:41822600-41836000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr5:41822600-41849200 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr5:41824400-41835800 Weak transcription Brain Cingulate Gyrus brain
18 chr5:41824600-41835800 Weak transcription Brain Hippocampus Middle brain
19 chr5:41824600-41859400 Weak transcription Spleen Spleen
20 chr5:41825800-41835800 Weak transcription Brain Substantia Nigra brain
21 chr5:41825800-41849200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr5:41826600-41835600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr5:41826800-41833600 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr5:41827800-41849800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:41828200-41836000 Weak transcription Colon Smooth Muscle Colon
26 chr5:41828600-41849200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr5:41828800-41849000 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr5:41829000-41833800 Strong transcription Hela-S3 cervix
29 chr5:41829000-41835800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr5:41829000-41838800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr5:41829200-41834800 Weak transcription Muscle Satellite Cultured Cells --
32 chr5:41829400-41851000 Weak transcription Fetal Intestine Small intestine
33 chr5:41829600-41834200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr5:41830000-41833600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr5:41830000-41834200 Strong transcription Dnd41 blood
36 chr5:41830000-41843400 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr5:41830200-41836000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr5:41830400-41833600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr5:41830400-41833800 Strong transcription HMEC breast
40 chr5:41830400-41834000 Strong transcription Primary T cells from cord blood blood
41 chr5:41830400-41834000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr5:41830400-41834200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:41830400-41834400 Strong transcription Primary T cells fromperipheralblood blood
44 chr5:41830400-41834600 Strong transcription Primary B cells from peripheral blood blood
45 chr5:41830600-41833800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr5:41830600-41834000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr5:41830600-41836000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr5:41830800-41849200 Weak transcription H1 Cell Line embryonic stem cell
49 chr5:41830800-41849800 Weak transcription Gastric stomach
50 chr5:41831000-41834000 Strong transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015