Variant report

Variant rs16871940
Chromosome Location chr5:41739626-41739627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41725600-41747400 Weak transcription Fetal Kidney kidney
2 chr5:41727400-41751400 Weak transcription Fetal Brain Female brain
3 chr5:41727800-41747200 Weak transcription NH-A brain
4 chr5:41727800-41758200 Weak transcription Esophagus oesophagus
5 chr5:41728600-41763800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr5:41729200-41755000 Weak transcription NHDF-Ad bronchial
7 chr5:41730200-41764000 Weak transcription Spleen Spleen
8 chr5:41730600-41760800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr5:41731400-41747200 Weak transcription Fetal Lung lung
10 chr5:41731400-41800400 Weak transcription Small Intestine intestine
11 chr5:41732400-41747200 Weak transcription HUVEC blood vessel
12 chr5:41732800-41739800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr5:41733400-41747400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr5:41733800-41741800 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr5:41734600-41757800 Weak transcription Fetal Intestine Small intestine
16 chr5:41734800-41742200 Strong transcription Dnd41 blood
17 chr5:41735200-41740600 Strong transcription Adipose Nuclei Adipose
18 chr5:41735200-41741800 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr5:41735200-41742800 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr5:41735200-41747400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr5:41735200-41747800 Weak transcription Fetal Heart heart
22 chr5:41735400-41740800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:41735400-41741000 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr5:41735400-41748000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr5:41735600-41741000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
26 chr5:41735600-41763200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:41735600-41763400 Weak transcription Fetal Brain Male brain
28 chr5:41735800-41741800 Strong transcription Primary T cells fromperipheralblood blood
29 chr5:41735800-41800400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr5:41736000-41740600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:41736000-41741200 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr5:41736000-41742000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:41736200-41763400 Weak transcription Psoas Muscle Psoas
34 chr5:41736600-41741000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr5:41736800-41741000 Strong transcription Primary B cells from peripheral blood blood
36 chr5:41736800-41763000 Weak transcription Fetal Muscle Trunk muscle
37 chr5:41737000-41739800 Weak transcription Brain Germinal Matrix brain
38 chr5:41737000-41741000 Strong transcription Primary B cells from cord blood blood
39 chr5:41737000-41742000 Strong transcription Fetal Thymus thymus
40 chr5:41737000-41754800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr5:41737200-41747400 Weak transcription HSMMtube muscle
42 chr5:41737200-41752200 Weak transcription H1 Cell Line embryonic stem cell
43 chr5:41737600-41746400 Weak transcription Primary hematopoietic stem cells blood
44 chr5:41737800-41763400 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr5:41738000-41740200 Strong transcription Left Ventricle heart
46 chr5:41738000-41740600 Strong transcription HMEC breast
47 chr5:41738200-41741000 Strong transcription Stomach Smooth Muscle stomach
48 chr5:41738400-41739800 Strong transcription Fetal Stomach stomach
49 chr5:41738400-41739800 Strong transcription Thymus Thymus
50 chr5:41738400-41740200 Strong transcription Primary T helper naive cells from peripheral blood blood

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