Variant report
| Variant | rs17739462 |
|---|---|
| Chromosome Location | chr5:41806453-41806454 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41756200-41813800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 2 | chr5:41778200-41838200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr5:41789600-41808200 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr5:41790400-41814000 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr5:41791600-41807600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 6 | chr5:41793400-41810400 | Weak transcription | Spleen | Spleen |
| 7 | chr5:41795400-41809400 | Weak transcription | Fetal Kidney | kidney |
| 8 | chr5:41795400-41809800 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr5:41795400-41813000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 10 | chr5:41795400-41816200 | Weak transcription | Colon Smooth Muscle | Colon |
| 11 | chr5:41795400-41835800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 12 | chr5:41795600-41806600 | Weak transcription | Lung | lung |
| 13 | chr5:41795600-41808000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr5:41795600-41808600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr5:41795600-41809000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 16 | chr5:41795800-41809000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 17 | chr5:41795800-41813000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 18 | chr5:41796600-41808800 | Weak transcription | Fetal Heart | heart |
| 19 | chr5:41796600-41825800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 20 | chr5:41796600-41830400 | Weak transcription | NH-A | brain |
| 21 | chr5:41796600-41830600 | Weak transcription | NHDF-Ad | bronchial |
| 22 | chr5:41796600-41830800 | Weak transcription | NHLF | lung |
| 23 | chr5:41796800-41812800 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr5:41797000-41815200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 25 | chr5:41797200-41815200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 26 | chr5:41797600-41809000 | Strong transcription | Dnd41 | blood |
| 27 | chr5:41798000-41807800 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 28 | chr5:41798600-41808800 | Strong transcription | Hela-S3 | cervix |
| 29 | chr5:41800800-41808400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr5:41800800-41810200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr5:41800800-41838600 | Weak transcription | Fetal Stomach | stomach |
| 32 | chr5:41801000-41808200 | Weak transcription | Gastric | stomach |
| 33 | chr5:41801000-41809600 | Weak transcription | Right Ventricle | heart |
| 34 | chr5:41801000-41810200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 35 | chr5:41801000-41810800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 36 | chr5:41801000-41815800 | Weak transcription | Esophagus | oesophagus |
| 37 | chr5:41801000-41818000 | Weak transcription | Fetal Intestine Large | intestine |
| 38 | chr5:41801000-41835800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr5:41801000-41849200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 40 | chr5:41801200-41808200 | Weak transcription | Ovary | ovary |
| 41 | chr5:41801200-41809200 | Weak transcription | Fetal Lung | lung |
| 42 | chr5:41801200-41809600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 43 | chr5:41801200-41809600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 44 | chr5:41801200-41809800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr5:41801200-41810200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr5:41801200-41810400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 47 | chr5:41801200-41811200 | Weak transcription | Fetal Muscle Leg | muscle |
| 48 | chr5:41801200-41811400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 49 | chr5:41801200-41815800 | Weak transcription | Osteobl | bone |
| 50 | chr5:41801200-41816000 | Weak transcription | HSMMtube | muscle |
