Variant report

Variant	rs318077
Chromosome Location	chr5:41453420-41453421
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs13155221	0.85[CHB][hapmap];0.83[JPT][hapmap]
rs1379309	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1379310	0.83[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.82[GIH][hapmap];0.83[JPT][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1457130	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1457132	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1565968	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs172753	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2124942	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2124943	0.86[AFR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2445888	0.92[ASN][1000 genomes]
rs2446961	0.92[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs318069	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs318070	0.85[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs318074	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs318075	0.92[ASN][1000 genomes]
rs318076	0.97[ASN][1000 genomes]
rs318080	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs318082	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs318083	1.00[ASN][1000 genomes]
rs318085	1.00[ASN][1000 genomes]
rs318089	0.98[ASN][1000 genomes]
rs3844180	0.83[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.82[GIH][hapmap];0.88[TSI][hapmap];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6451576	0.84[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7724484	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41443600-41456200	Enhancers	Fetal Heart	heart
2	chr5:41448600-41453800	Weak transcription	Left Ventricle	heart
3	chr5:41450800-41453800	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr5:41451000-41454600	Weak transcription	Right Ventricle	heart
5	chr5:41452800-41457600	Weak transcription	Fetal Intestine Large	intestine
6	chr5:41452800-41494000	Weak transcription	Ovary	ovary
7	chr5:41453400-41455000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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