Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11120125	1.00[ASN][1000 genomes]
rs11801377	1.00[ASN][1000 genomes]
rs17020842	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs17020918	1.00[ASN][1000 genomes]
rs17020923	1.00[ASN][1000 genomes]
rs17704470	0.82[EUR][1000 genomes]
rs320389	0.95[EUR][1000 genomes]
rs320417	0.91[EUR][1000 genomes]
rs320418	0.90[EUR][1000 genomes]
rs320419	0.93[EUR][1000 genomes]
rs320420	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs320423	0.93[EUR][1000 genomes]
rs320425	0.93[EUR][1000 genomes]
rs320429	1.00[ASN][1000 genomes]
rs57318993	1.00[ASN][1000 genomes]
rs57534780	1.00[ASN][1000 genomes]
rs58047388	1.00[ASN][1000 genomes]
rs58141535	1.00[ASN][1000 genomes]
rs58489960	1.00[ASN][1000 genomes]
rs59165361	1.00[ASN][1000 genomes]
rs59319827	1.00[ASN][1000 genomes]
rs59349475	1.00[ASN][1000 genomes]
rs60866557	1.00[ASN][1000 genomes]
rs6659752	0.84[EUR][1000 genomes]
rs6688960	1.00[ASN][1000 genomes]
rs74142114	1.00[ASN][1000 genomes]
rs74142116	1.00[ASN][1000 genomes]
rs74142117	1.00[ASN][1000 genomes]
rs74142506	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832525	chr1:213580476-213782815	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213691400-213693400	Enhancers	HepG2	liver

Quick Search: