Variant report

Variant	rs34105297
Chromosome Location	chr19:39184669-39184670
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:39184074-39184912	HL-60	blood:	n/a	n/a
2	EP300	chr19:39183275-39184928	A549	lung:	n/a	n/a
3	POLR2A	chr19:39183815-39184843	HUVEC	blood vessel:	n/a	n/a
4	POLR2A	chr19:39184524-39184671	H1-hESC	embryonic stem cell:	n/a	n/a
5	RAD21	chr19:39184043-39184724	IMR90	lung:	n/a	chr19:39184348-39184362 chr19:39184146-39184158
6	SIN3AK20	chr19:39183868-39184763	A549	lung:	n/a	n/a
7	FOS	chr19:39183940-39184759	HUVEC	blood vessel:	n/a	chr19:39184582-39184593
8	POLR2A	chr19:39184437-39184845	GM12892	blood:	n/a	n/a
9	SP1	chr19:39183659-39184991	A549	lung:	n/a	chr19:39184241-39184252
10	TCF12	chr19:39183900-39184751	ECC-1	luminal epithelium:	n/a	n/a
11	MAX	chr19:39184054-39184901	SK-N-SH	brain:	n/a	chr19:39184684-39184694
12	EP300	chr19:39184053-39184831	SK-N-SH_RA	brain:	n/a	n/a
13	EP300	chr19:39182406-39185002	SK-N-SH	brain:	n/a	n/a
14	RUNX3	chr19:39184400-39184890	GM12878	blood:	n/a	n/a
15	TBL1XR1	chr19:39184667-39184787	GM12878	blood:	n/a	n/a
16	TCF12	chr19:39183783-39184857	SK-N-SH	brain:	n/a	n/a
17	MAX	chr19:39183445-39184827	A549	lung:	n/a	chr19:39184684-39184694
18	POLR2A	chr19:39183552-39184922	U87	brain:	n/a	n/a
19	POLR2A	chr19:39182566-39184723	H1-hESC	embryonic stem cell:	n/a	n/a
20	EP300	chr19:39183449-39184973	A549	lung:	n/a	n/a
21	POLR2A	chr19:39184235-39184678	GM12891	blood:	n/a	n/a
22	GABPA	chr19:39183834-39184769	A549	lung:	n/a	n/a
23	POLR2A	chr19:39184386-39184975	HL-60	blood:	n/a	n/a
24	POLR2A	chr19:39184549-39184752	Hela-S3	cervix:	n/a	n/a
25	EP300	chr19:39183783-39184831	SK-N-SH	brain:	n/a	n/a
26	BCL3	chr19:39182347-39184808	A549	lung:	n/a	chr19:39183286-39183295
27	GATA2	chr19:39184167-39184709	HUVEC	blood vessel:	n/a	n/a
28	POLR2A	chr19:39183859-39184788	HCT-116	colon:	n/a	n/a
29	FOSL1	chr19:39183876-39184682	HCT-116	colon:	n/a	chr19:39184582-39184593
30	EP300	chr19:39184565-39184852	SK-N-SH_RA	brain:	n/a	n/a
31	JUND	chr19:39182457-39184939	A549	lung:	n/a	chr19:39184582-39184593
32	POLR2A	chr19:39183915-39184892	PFSK-1	brain:	n/a	n/a
33	FOSL2	chr19:39183909-39184870	SK-N-SH	brain:	n/a	chr19:39184582-39184593
34	SP1	chr19:39183229-39184861	A549	lung:	n/a	chr19:39184241-39184252
35	POLR2A	chr19:39183419-39184928	U87	brain:	n/a	n/a
36	POLR2A	chr19:39182534-39184807	A549	lung:	n/a	n/a
37	POLR2A	chr19:39183919-39184922	HUVEC	blood vessel:	n/a	n/a
38	EP300	chr19:39183343-39184811	ECC-1	luminal epithelium:	n/a	n/a
39	MAX	chr19:39183961-39184816	SK-N-SH	brain:	n/a	chr19:39184684-39184694
40	FOSL2	chr19:39183484-39184860	A549	lung:	n/a	chr19:39184582-39184593
41	MXI1	chr19:39182401-39184893	SK-N-SH	brain:	n/a	n/a
42	SIX5	chr19:39182347-39184995	A549	lung:	n/a	n/a
43	POLR2A	chr19:39182417-39184864	HCT-116	colon:	n/a	n/a
44	GATA3	chr19:39182220-39184991	A549	lung:	n/a	chr19:39183348-39183364 chr19:39183970-39183981
45	POLR2A	chr19:39183488-39184729	K562	blood:	n/a	n/a
46	CREB1	chr19:39184091-39184705	A549	lung:	n/a	n/a
47	FOSL1	chr19:39183784-39185003	HCT-116	colon:	n/a	chr19:39184582-39184593
48	TCF12	chr19:39183943-39184702	ECC-1	luminal epithelium:	n/a	n/a
49	POLR2A	chr19:39164600-39206677	PANC-1	pancreas:	n/a	n/a
50	REST	chr19:39183839-39184858	A549	lung:	n/a	chr19:39184771-39184784

No.	Distal block	Cell Line	Cell type
1	chr19:39183521..39187102-chr19:39327849..39329398,3	MCF-7	breast:
2	chr19:39181974..39184740-chr19:39331353..39332941,2	MCF-7	breast:
3	chr19:39184301..39186024-chr19:39197035..39198967,2	K562	blood:
4	chr19:39184438..39186099-chr19:39190948..39193871,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000267375	TF binding region
ENSG00000130402	Chromatin interaction
ENSG00000104824	Chromatin interaction

Extended variants
information (count: 115 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:110)

rs_ID	r²[population]
rs1106372	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12971309	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12972987	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12972997	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12974733	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12975079	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12975256	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12975953	0.96[AMR][1000 genomes]
rs12976598	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12977238	0.81[EUR][1000 genomes]
rs12977599	0.88[AFR][1000 genomes]
rs12978273	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12978715	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12978914	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12979947	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12980399	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12981131	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12981984	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12983010	0.85[EUR][1000 genomes]
rs12983550	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12984794	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12985030	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12985558	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12985871	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12986032	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12986121	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12986337	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17589359	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2001856	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2086148	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2126970	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2279145	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2279146	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2287728	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34026184	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34054765	1.00[AMR][1000 genomes]
rs34082501	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34126343	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34134906	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34305426	1.00[AMR][1000 genomes]
rs34332511	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34368672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34525537	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs34558140	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34563817	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34592527	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34695688	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34703567	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34717167	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34843929	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34862518	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34899634	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34911882	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35007285	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35074956	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35096737	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35134120	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35193699	0.88[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs35281901	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35403788	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35436155	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35576862	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35640008	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35666464	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35685980	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35691365	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35716073	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35729716	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35807146	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35855940	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35856174	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35941349	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3786840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45599933	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56817884	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56946356	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57230275	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60454376	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61121905	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62119101	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62119102	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62119103	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62119105	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62119109	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62119116	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62120068	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62120072	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62120074	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62120159	0.84[AFR][1000 genomes]
rs62121763	0.88[AFR][1000 genomes]
rs62121819	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62121821	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62121823	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62121827	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62121828	0.92[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs62121829	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71356822	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7246368	0.88[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7248577	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7260070	0.96[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs8103530	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8104815	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105055	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105069	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105080	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs8105216	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105550	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs899199	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs899200	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs973009	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833828	chr19:39084759-39257979	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv1057899	chr19:39088319-39475493	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
3	nsv817834	chr19:39174332-39237950	Enhancers Flanking Active TSS Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv911668	chr19:39174669-39291771	Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
5	esv1826260	chr19:39178364-39248836	Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs34105297	EIF3K	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39164400-39200200	Genic enhancers	Fetal Intestine Small	intestine
2	chr19:39177200-39195000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr19:39178600-39187800	Enhancers	Left Ventricle	heart
4	chr19:39178600-39190600	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr19:39178600-39198200	Genic enhancers	Fetal Intestine Large	intestine
6	chr19:39179000-39189400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr19:39179600-39205800	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr19:39180000-39184800	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr19:39180000-39186000	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr19:39180000-39191600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr19:39180000-39192400	Genic enhancers	Lung	lung
12	chr19:39180600-39185000	Enhancers	NHDF-Ad	bronchial
13	chr19:39180800-39184800	Genic enhancers	HUES6 Cell Line	embryonic stem cell
14	chr19:39180800-39185000	Enhancers	Pancreas	Pancrea
15	chr19:39180800-39187000	Enhancers	Primary T cells fromperipheralblood	blood
16	chr19:39181000-39186600	Enhancers	Primary T helper cells fromperipheralblood	blood
17	chr19:39181400-39186800	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr19:39181600-39184800	Enhancers	Brain Substantia Nigra	brain
19	chr19:39181800-39186400	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr19:39182000-39185600	Enhancers	Cortex derived primary cultured neurospheres	brain
21	chr19:39182000-39194200	Genic enhancers	Fetal Muscle Leg	muscle
22	chr19:39182200-39187800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
23	chr19:39182200-39192600	Enhancers	Liver	Liver
24	chr19:39182200-39193400	Enhancers	Right Atrium	heart
25	chr19:39182200-39193800	Genic enhancers	Fetal Stomach	stomach
26	chr19:39182200-39214200	Genic enhancers	Fetal Muscle Trunk	muscle
27	chr19:39182200-39225200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
28	chr19:39182400-39184800	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr19:39182400-39184800	Genic enhancers	Gastric	stomach
30	chr19:39182400-39184800	Enhancers	Psoas Muscle	Psoas
31	chr19:39182400-39184800	Flanking Active TSS	Stomach Smooth Muscle	stomach
32	chr19:39182400-39186000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr19:39182400-39186600	Enhancers	Primary hematopoietic stem cells	blood
34	chr19:39182400-39187000	Enhancers	Stomach Mucosa	stomach
35	chr19:39182400-39189600	Enhancers	Brain Angular Gyrus	brain
36	chr19:39182400-39193600	Genic enhancers	Esophagus	oesophagus
37	chr19:39182600-39184800	Genic enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr19:39182600-39184800	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
39	chr19:39182600-39184800	Transcr. at gene 5' and 3'	A549	lung
40	chr19:39182600-39185000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr19:39182600-39185600	Genic enhancers	Spleen	Spleen
42	chr19:39182600-39185800	Enhancers	Primary B cells from peripheral blood	blood
43	chr19:39182600-39185800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
44	chr19:39182600-39186000	Enhancers	Fetal Thymus	thymus
45	chr19:39182600-39186200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr19:39182600-39186400	Enhancers	Primary T killer memory cells from peripheral blood	blood
47	chr19:39182600-39186600	Genic enhancers	Sigmoid Colon	Sigmoid Colon
48	chr19:39182600-39186800	Transcr. at gene 5' and 3'	Breast Myoepithelial Primary Cells	Breast
49	chr19:39182600-39190200	Genic enhancers	Colonic Mucosa	Colon
50	chr19:39182600-39190800	Genic enhancers	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links