The 2.0 version of rSNPBase

Variant report

Variant rs34695688
Chromosome Location chr19:39173645-39173646
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39161200-39176000 Weak transcription Fetal Brain Male brain
2 chr19:39161200-39176000 Weak transcription Fetal Brain Female brain
3 chr19:39164400-39200200 Genic enhancers Fetal Intestine Small intestine
4 chr19:39164600-39173800 Genic enhancers HepG2 liver
5 chr19:39164600-39178200 Enhancers Primary T cells fromperipheralblood blood
6 chr19:39164800-39173800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr19:39164800-39177600 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr19:39164800-39179200 Enhancers Pancreas Pancrea
9 chr19:39164800-39179800 Enhancers Primary neutrophils fromperipheralblood blood
10 chr19:39164800-39183800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr19:39165000-39174200 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr19:39165400-39178200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr19:39165600-39174000 Weak transcription H9 Cell Line embryonic stem cell
14 chr19:39166000-39178200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr19:39166200-39173800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr19:39166200-39173800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr19:39166400-39173800 Genic enhancers HMEC breast
18 chr19:39167200-39173800 Genic enhancers Fetal Intestine Large intestine
19 chr19:39167200-39175600 Genic enhancers Primary hematopoietic stem cells short term culture blood
20 chr19:39167400-39173800 Genic enhancers NHLF lung
21 chr19:39167400-39174400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr19:39167400-39180800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr19:39167600-39173800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:39167600-39174000 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr19:39167800-39174000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:39167800-39174000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
27 chr19:39167800-39175200 Weak transcription Primary T cells from cord blood blood
28 chr19:39168400-39177400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr19:39168800-39173800 Enhancers Right Ventricle heart
30 chr19:39169000-39174000 Genic enhancers HSMM muscle
31 chr19:39169200-39174000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr19:39169200-39174200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:39169200-39181000 Enhancers Primary monocytes fromperipheralblood blood
34 chr19:39169400-39174000 Genic enhancers Breast Myoepithelial Primary Cells Breast
35 chr19:39169800-39173800 Genic enhancers K562 blood
36 chr19:39170000-39177400 Enhancers Liver Liver
37 chr19:39170000-39183400 Enhancers Placenta Placenta
38 chr19:39170200-39173800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:39170200-39174200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr19:39170200-39176800 Weak transcription Thymus Thymus
41 chr19:39170200-39177600 Enhancers Primary hematopoietic stem cells blood
42 chr19:39170200-39180000 Enhancers Adipose Nuclei Adipose
43 chr19:39170800-39173800 Weak transcription Ovary ovary
44 chr19:39170800-39174000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr19:39170800-39174400 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr19:39171200-39176800 Genic enhancers Fetal Muscle Leg muscle
47 chr19:39171400-39174400 Enhancers Fetal Heart heart
48 chr19:39171800-39174800 Genic enhancers Sigmoid Colon Sigmoid Colon
49 chr19:39171800-39178200 Enhancers Psoas Muscle Psoas
50 chr19:39172200-39174000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015