Variant report

Variant	rs62120074
Chromosome Location	chr19:39226927-39226928
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:108)
CpG islands
(count:0)
Chromatin interactive
region (count:15)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:108 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:39226684-39227056	GM12878	blood:	n/a	n/a
2	MAX	chr19:39226751-39227047	K562	blood:	n/a	n/a
3	MYC	chr19:39226709-39226954	K562	blood:	n/a	n/a
4	ZEB1	chr19:39226688-39227006	GM12878	blood:	n/a	n/a
5	POLR2A	chr19:39226697-39227050	K562	blood:	n/a	n/a
6	HEY1	chr19:39226695-39226993	K562	blood:	n/a	n/a
7	EGR1	chr19:39226619-39227094	HCT-116	colon:	n/a	chr19:39226805-39226819 chr19:39226734-39226744
8	ZNF143	chr19:39226778-39226980	GM12878	blood:	n/a	n/a
9	MAX	chr19:39226778-39226978	GM12878	blood:	n/a	n/a
10	POLR2A	chr19:39226645-39227651	PANC-1	pancreas:	n/a	n/a
11	FOXP2	chr19:39226682-39227087	PFSK-1	brain:	n/a	n/a
12	POLR2A	chr19:39226722-39227020	H1-hESC	embryonic stem cell:	n/a	n/a
13	PAX5	chr19:39226702-39227113	GM12892	blood:	n/a	n/a
14	MAX	chr19:39226664-39226998	K562	blood:	n/a	n/a
15	JUND	chr19:39226646-39227371	A549	lung:	n/a	n/a
16	EGR1	chr19:39226641-39227043	K562	blood:	n/a	chr19:39226805-39226819 chr19:39226734-39226744
17	POLR2A	chr19:39226644-39227048	ECC-1	luminal epithelium:	n/a	n/a
18	POLR2A	chr19:39226726-39227423	A549	lung:	n/a	n/a
19	POLR2A	chr19:39226679-39227304	MCF-7	breast:	n/a	n/a
20	SIN3AK20	chr19:39226655-39227092	A549	lung:	n/a	n/a
21	POLR2A	chr19:39226680-39227026	GM12878	blood:	n/a	n/a
22	YY1	chr19:39226674-39226998	GM12892	blood:	n/a	n/a
23	MAX	chr19:39226613-39228363	A549	lung:	n/a	n/a
24	SIN3AK20	chr19:39226614-39227343	PANC-1	pancreas:	n/a	n/a
25	POLR2A	chr19:39226678-39227032	A549	lung:	n/a	n/a
26	CREB1	chr19:39226681-39227057	K562	blood:	n/a	n/a
27	ESR1	chr19:39226889-39227390	ECC-1	luminal epithelium:	n/a	chr19:39227120-39227135 chr19:39227141-39227156 chr19:39227162-39227177 chr19:39227099-39227114
28	POLR2A	chr19:39226687-39227024	A549	lung:	n/a	n/a
29	MYC	chr19:39226691-39227023	K562	blood:	n/a	n/a
30	MAZ	chr19:39226490-39228072	IMR90	lung:	n/a	n/a
31	NR2F2	chr19:39226641-39227408	MCF-7	breast:	n/a	n/a
32	POLR2A	chr19:39226628-39227965	K562	blood:	n/a	n/a
33	MYC	chr19:39226762-39226932	K562	blood:	n/a	n/a
34	PAX5	chr19:39226699-39226966	GM12878	blood:	n/a	n/a
35	POLR2A	chr19:39226637-39227029	GM12892	blood:	n/a	n/a
36	PBX3	chr19:39226619-39227075	SK-N-SH	brain:	n/a	n/a
37	CTCF	chr19:39226780-39226930	NHEK	skin:	n/a	n/a
38	MAZ	chr19:39226687-39227045	K562	blood:	n/a	n/a
39	MAX	chr19:39226640-39227464	H1-hESC	embryonic stem cell:	n/a	n/a
40	MXI1	chr19:39226720-39226931	K562	blood:	n/a	n/a
41	ZBTB7A	chr19:39226559-39227706	ECC-1	luminal epithelium:	n/a	chr19:39227221-39227228
42	TCF3	chr19:39226699-39227057	GM12878	blood:	n/a	n/a
43	E2F6	chr19:39226747-39226937	K562	blood:	n/a	n/a
44	POLR2A	chr19:39226828-39226928	H1-hESC	embryonic stem cell:	n/a	n/a
45	ZBTB7A	chr19:39226614-39227121	ECC-1	luminal epithelium:	n/a	n/a
46	MXI1	chr19:39226758-39226945	GM12878	blood:	n/a	n/a
47	POLR2A	chr19:39226701-39227004	H1-neurons	neurons:	n/a	n/a
48	MYC	chr19:39226698-39227070	MCF-7	breast:	n/a	n/a
49	BCL3	chr19:39226637-39227559	A549	lung:	n/a	n/a
50	REST	chr19:39226647-39227068	PANC-1	pancreas:	n/a	n/a

No data

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:39224374..39227247-chr19:39227661..39229256,2	MCF-7	breast:
2	chr19:39218553..39228703-chr19:39324875..39331730,17	MCF-7	breast:
3	chr19:39225035..39229236-chr19:39320225..39324035,5	K562	blood:
4	chr19:39226181..39228990-chr19:39419347..39420876,2	K562	blood:
5	chr19:39136334..39138370-chr19:39226702..39229509,2	MCF-7	breast:
6	chr19:39226722..39228357-chr19:39340194..39343791,3	K562	blood:
7	chr19:39226378..39228332-chr19:39339696..39342519,3	K562	blood:
8	chr19:39220252..39229073-chr19:39338371..39342954,10	MCF-7	breast:
9	chr19:39224613..39228237-chr19:39319464..39324480,6	MCF-7	breast:
10	chr19:39225241..39228879-chr19:39342547..39344492,3	K562	blood:
11	chr19:39212206..39230741-chr19:39336504..39344817,33	MCF-7	breast:
12	chr19:39226859..39228990-chr19:39419347..39420977,2	K562	blood:
13	chr19:39223964..39228282-chr19:39327392..39332302,8	MCF-7	breast:
14	chr19:39138420..39142103-chr19:39224990..39229224,5	MCF-7	breast:
15	chr19:39221972..39229243-chr19:39319630..39326763,11	K562	blood:

No data

Variant related genes	Relation type
ENSG00000267892	TF binding region
CAPN12	TF binding region
ENSG00000104824	Chromatin interaction
ENSG00000267892	Chromatin interaction
ENSG00000104835	Chromatin interaction
ENSG00000130402	Chromatin interaction
ENSG00000104823	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:107)

rs_ID	r²[population]
rs1105759	0.83[ASN][1000 genomes]
rs1106372	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1136956	0.91[ASN][1000 genomes]
rs12971309	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12972987	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12972997	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12974733	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12975079	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12975256	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12975953	0.87[AMR][1000 genomes]
rs12976598	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs12978273	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12978715	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12978914	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12979947	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12980399	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12981131	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12981984	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12983010	0.92[EUR][1000 genomes]
rs12983550	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12984794	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12985030	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12985558	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12985871	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12986032	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12986121	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12986337	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17589359	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2001856	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2086148	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2126970	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2279145	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2279146	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2287728	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34026184	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34054765	0.91[AMR][1000 genomes]
rs34082501	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34105297	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34126343	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34134906	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34305426	0.91[AMR][1000 genomes]
rs34332511	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34368672	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34525537	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs34558140	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34563817	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34592527	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34695688	0.86[EUR][1000 genomes]
rs34703567	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34717167	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34843929	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34862518	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34899634	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34911882	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35007285	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35074956	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35096737	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35134120	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35281901	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35403788	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35436155	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35576862	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35640008	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35666464	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35685980	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35691365	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35716073	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35729716	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35807146	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35855940	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35856174	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35941349	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3786840	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs45599933	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56817884	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs56946356	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57230275	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60454376	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61121905	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62119101	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119102	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119103	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119105	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119109	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62119115	0.91[ASN][1000 genomes]
rs62119116	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62120068	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62120072	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62120159	0.88[AFR][1000 genomes]
rs62121819	0.87[EUR][1000 genomes]
rs62121821	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121823	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121827	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121828	0.81[AFR][1000 genomes]
rs62121829	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs71356822	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7248577	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7260070	0.85[AFR][1000 genomes]
rs8103530	0.87[EUR][1000 genomes]
rs8104815	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8105055	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8105069	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8105080	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8105216	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8105550	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs899199	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs899200	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833828	chr19:39084759-39257979	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv1057899	chr19:39088319-39475493	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
3	nsv817834	chr19:39174332-39237950	Enhancers Flanking Active TSS Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv911668	chr19:39174669-39291771	Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
5	esv1826260	chr19:39178364-39248836	Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	esv1837023	chr19:39190588-39425722	Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
7	nsv911669	chr19:39196745-39231548	Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
8	esv3421629	chr19:39225537-39228485	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
9	esv3360199	chr19:39225562-39228860	Bivalent Enhancer Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
10	esv3437673	chr19:39225662-39228610	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39222600-39227200	Weak transcription	Fetal Kidney	kidney
2	chr19:39222800-39227400	Weak transcription	Aorta	Aorta
3	chr19:39223600-39227200	Weak transcription	Fetal Lung	lung
4	chr19:39223800-39227400	Enhancers	HSMM	muscle
5	chr19:39224000-39227000	Enhancers	NH-A	brain
6	chr19:39224200-39227000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr19:39225000-39227200	Weak transcription	Small Intestine	intestine
8	chr19:39225000-39228200	Enhancers	Primary T cells from cord blood	blood
9	chr19:39225200-39227200	Active TSS	Fetal Intestine Large	intestine
10	chr19:39225200-39227400	Active TSS	Rectal Smooth Muscle	rectum
11	chr19:39225400-39227600	Active TSS	HUES64 Cell Line	embryonic stem cell
12	chr19:39225600-39227600	Active TSS	H9 Cell Line	embryonic stem cell
13	chr19:39225800-39227200	Active TSS	Breast Myoepithelial Primary Cells	Breast
14	chr19:39225800-39227400	Active TSS	Rectal Mucosa Donor 29	rectum
15	chr19:39225800-39227600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
16	chr19:39225800-39227600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr19:39225800-39228000	Active TSS	ES-I3 Cell Line	embryonic stem cell
18	chr19:39225800-39228000	Weak transcription	NHLF	lung
19	chr19:39226000-39227000	Active TSS	iPS-18 Cell Line	embryonic stem cell
20	chr19:39226000-39227200	Active TSS	iPS-15b Cell Line	embryonic stem cell
21	chr19:39226000-39227200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
22	chr19:39226000-39227200	Weak transcription	Stomach Mucosa	stomach
23	chr19:39226000-39227200	Bivalent/Poised TSS	Thymus	Thymus
24	chr19:39226000-39227600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr19:39226000-39228400	Enhancers	Placenta	Placenta
26	chr19:39226000-39229200	Weak transcription	Gastric	stomach
27	chr19:39226200-39227000	Active TSS	Primary B cells from peripheral blood	blood
28	chr19:39226200-39227000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
29	chr19:39226200-39227000	Active TSS	Primary T regulatory cells fromperipheralblood	blood
30	chr19:39226200-39227000	Active TSS	A549	lung
31	chr19:39226200-39227200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
32	chr19:39226200-39227200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr19:39226200-39227200	Active TSS	Fetal Intestine Small	intestine
34	chr19:39226200-39227400	Enhancers	Sigmoid Colon	Sigmoid Colon
35	chr19:39226200-39227400	Active TSS	HMEC	breast
36	chr19:39226200-39227600	Enhancers	Primary T helper naive cells from peripheral blood	blood
37	chr19:39226200-39227600	Active TSS	Duodenum Mucosa	Duodenum
38	chr19:39226200-39228000	Active TSS	Primary hematopoietic stem cells	blood
39	chr19:39226200-39228000	Active TSS	Colonic Mucosa	Colon
40	chr19:39226200-39228400	Enhancers	GM12878-XiMat	blood
41	chr19:39226200-39228600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
42	chr19:39226200-39228600	Enhancers	Spleen	Spleen
43	chr19:39226200-39230200	Weak transcription	NHEK	skin
44	chr19:39226200-39230600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr19:39226400-39227000	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
46	chr19:39226400-39227000	Active TSS	Fetal Adrenal Gland	Adrenal Gland
47	chr19:39226600-39227000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr19:39226600-39227000	Active TSS	Brain Cingulate Gyrus	brain
49	chr19:39226600-39227000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
50	chr19:39226600-39227000	Flanking Active TSS	Fetal Muscle Leg	muscle

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