Variant report

Variant	rs45599933
Chromosome Location	chr19:39225046-39225047
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:39223740-39225954	U87	brain:	n/a	n/a
2	SIN3AK20	chr19:39223100-39226358	PANC-1	pancreas:	n/a	n/a
3	POLR2A	chr19:39223292-39226313	MCF-7	breast:	n/a	n/a
4	PBX3	chr19:39223832-39226377	A549	lung:	n/a	n/a
5	JUND	chr19:39223167-39226365	A549	lung:	n/a	chr19:39224435-39224443 chr19:39224433-39224445 chr19:39224431-39224442
6	POLR2A	chr19:39224870-39225537	GM12891	blood:	n/a	n/a
7	REST	chr19:39224502-39226286	A549	lung:	n/a	n/a
8	POLR2A	chr19:39221228-39226317	H1-hESC	embryonic stem cell:	n/a	n/a
9	POLR2A	chr19:39224883-39225374	GM12878	blood:	n/a	n/a
10	POLR2A	chr19:39223763-39225544	GM12878	blood:	n/a	n/a
11	POLR2A	chr19:39224879-39225887	PFSK-1	brain:	n/a	n/a
12	POLR2A	chr19:39224905-39225357	GM18505	blood:	n/a	n/a
13	POLR2A	chr19:39223097-39225075	SK-N-MC	brain:	n/a	n/a
14	POLR2A	chr19:39224380-39225333	GM12891	blood:	n/a	n/a
15	POLR2A	chr19:39223643-39226161	HUVEC	blood vessel:	n/a	n/a
16	POLR2A	chr19:39223236-39226266	HepG2	liver:	n/a	n/a
17	SP1	chr19:39224912-39226374	A549	lung:	n/a	chr19:39225419-39225433 chr19:39226104-39226113 chr19:39224924-39224938 chr19:39226104-39226113 chr19:39225426-39225440 chr19:39226103-39226114 chr19:39225939-39225953 chr19:39226105-39226114
18	POLR2A	chr19:39224911-39225270	HCT-116	colon:	n/a	n/a
19	POLR2A	chr19:39224934-39225350	GM12891	blood:	n/a	n/a
20	MAX	chr19:39223136-39226382	A549	lung:	n/a	chr19:39225279-39225290 chr19:39225280-39225289 chr19:39224434-39224443
21	POLR2A	chr19:39224991-39225118	Hela-S3	cervix:	n/a	n/a
22	POLR2A	chr19:39223909-39226321	ECC-1	luminal epithelium:	n/a	n/a
23	RUNX3	chr19:39224753-39225289	GM12878	blood:	n/a	n/a
24	SIX5	chr19:39223165-39226400	A549	lung:	n/a	chr19:39223670-39223684
25	EP300	chr19:39224505-39226255	A549	lung:	n/a	n/a
26	POLR2A	chr19:39224908-39225253	HCT-116	colon:	n/a	n/a
27	POLR2A	chr19:39224968-39225129	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr19:39224895-39225418	GM12878	blood:	n/a	n/a
29	POLR2A	chr19:39225011-39225497	GM12878	blood:	n/a	n/a
30	POLR2A	chr19:39224620-39225719	HUVEC	blood vessel:	n/a	n/a
31	POLR2A	chr19:39221071-39225757	HepG2	liver:	n/a	n/a
32	YY1	chr19:39223085-39225646	A549	lung:	n/a	chr19:39223373-39223384
33	SPI1	chr19:39224948-39225250	GM12878	blood:	n/a	n/a
34	SP1	chr19:39224887-39226381	A549	lung:	n/a	chr19:39225419-39225433 chr19:39226104-39226113 chr19:39224924-39224938 chr19:39226104-39226113 chr19:39225426-39225440 chr19:39226103-39226114 chr19:39225939-39225953 chr19:39226105-39226114
35	POLR2A	chr19:39223889-39225847	HUVEC	blood vessel:	n/a	n/a
36	POLR2A	chr19:39224790-39225831	HUVEC	blood vessel:	n/a	n/a
37	FOSL2	chr19:39224920-39225302	A549	lung:	n/a	n/a
38	POLR2A	chr19:39224832-39225296	GM12892	blood:	n/a	n/a
39	ETS1	chr19:39224908-39225611	A549	lung:	n/a	chr19:39225055-39225066 chr19:39225053-39225067 chr19:39225056-39225067
40	FOSL2	chr19:39223785-39226303	A549	lung:	n/a	chr19:39224435-39224443 chr19:39224433-39224445 chr19:39224431-39224442
41	USF1	chr19:39224085-39225758	A549	lung:	n/a	n/a
42	POLR2A	chr19:39206681-39226302	PANC-1	pancreas:	n/a	n/a
43	ZBTB33	chr19:39224013-39226329	A549	lung:	n/a	n/a
44	POLR2A	chr19:39221828-39226356	U87	brain:	n/a	n/a
45	ATF3	chr19:39224094-39225709	A549	lung:	n/a	n/a
46	ELF1	chr19:39224736-39226313	GM12878	blood:	n/a	chr19:39225057-39225070
47	MAZ	chr19:39225034-39225333	GM12878	blood:	n/a	chr19:39225279-39225290 chr19:39225280-39225289
48	ELF1	chr19:39224914-39225245	K562	blood:	n/a	chr19:39225057-39225070
49	POLR2A	chr19:39224747-39226348	A549	lung:	n/a	n/a
50	POLR2A	chr19:39224813-39225546	GM12892	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:39224374..39227247-chr19:39227661..39229256,2	MCF-7	breast:
2	chr19:39218553..39228703-chr19:39324875..39331730,17	MCF-7	breast:
3	chr19:39225035..39229236-chr19:39320225..39324035,5	K562	blood:
4	chr19:39217752..39221022-chr19:39222465..39225520,5	MCF-7	breast:
5	chr19:39220252..39229073-chr19:39338371..39342954,10	MCF-7	breast:
6	chr19:39224613..39228237-chr19:39319464..39324480,6	MCF-7	breast:
7	chr19:39138134..39140195-chr19:39224165..39225829,2	K562	blood:
8	chr19:39224740..39226667-chr19:39338777..39342180,3	K562	blood:
9	chr19:39212206..39230741-chr19:39336504..39344817,33	MCF-7	breast:
10	chr19:39223964..39228282-chr19:39327392..39332302,8	MCF-7	breast:
11	chr19:39138420..39142103-chr19:39224990..39229224,5	MCF-7	breast:
12	chr19:39221972..39229243-chr19:39319630..39326763,11	K562	blood:
13	chr19:39137588..39140195-chr19:39223883..39225829,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LGALS7-1	chr19:39223761-39226312	NONHSAT066236

Variant related genes	Relation type
ENSG00000267892	TF binding region
ENSG00000130402	Chromatin interaction
ENSG00000267892	Chromatin interaction
ENSG00000104823	Chromatin interaction
ENSG00000104824	Chromatin interaction

Extended variants
information (count: 114 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:107)

rs_ID	r²[population]
rs1105759	0.81[ASN][1000 genomes]
rs1106372	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1136956	0.88[ASN][1000 genomes]
rs12971309	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12972987	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12972997	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12974733	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12975079	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12975256	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12975953	0.96[AMR][1000 genomes]
rs12976598	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12978273	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12978715	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12978914	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12979947	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12980399	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12981131	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12981984	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12983010	0.92[EUR][1000 genomes]
rs12983550	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12984794	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12985030	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12985558	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12985871	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12986032	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12986121	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12986337	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17589359	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2001856	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2086148	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2126970	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2279145	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2279146	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2287728	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34026184	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34054765	1.00[AMR][1000 genomes]
rs34082501	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34105297	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34126343	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34134906	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34305426	1.00[AMR][1000 genomes]
rs34332511	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34368672	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34525537	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs34558140	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34563817	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34592527	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34695688	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34703567	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34717167	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34843929	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34862518	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34899634	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34911882	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35007285	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35074956	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35096737	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35134120	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35281901	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35403788	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35436155	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35576862	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35640008	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35666464	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35685980	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35691365	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35716073	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35729716	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35807146	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35855940	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35856174	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35941349	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3786840	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56817884	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs56946356	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57230275	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60454376	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61121905	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62119101	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119102	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119103	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119105	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119109	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62119115	0.88[ASN][1000 genomes]
rs62119116	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62120068	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62120072	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62120074	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62120159	0.88[AFR][1000 genomes]
rs62121819	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62121821	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121823	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121827	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62121828	0.81[AFR][1000 genomes]
rs62121829	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs71356822	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7248577	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7260070	0.85[AFR][1000 genomes]
rs8103530	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs8104815	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105055	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105069	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105080	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8105216	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105550	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs899199	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs899200	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833828	chr19:39084759-39257979	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv1057899	chr19:39088319-39475493	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
3	nsv817834	chr19:39174332-39237950	Enhancers Flanking Active TSS Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv911668	chr19:39174669-39291771	Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
5	esv1826260	chr19:39178364-39248836	Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	esv1837023	chr19:39190588-39425722	Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
7	nsv911669	chr19:39196745-39231548	Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs45599933	EIF3K	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39182200-39225200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr19:39218000-39226800	Weak transcription	Psoas Muscle	Psoas
3	chr19:39218600-39225200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr19:39218800-39225200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr19:39218800-39226600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr19:39220800-39226800	Weak transcription	Colon Smooth Muscle	Colon
7	chr19:39221200-39225400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr19:39221200-39226000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr19:39222000-39225200	Enhancers	Pancreas	Pancrea
10	chr19:39222200-39225200	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr19:39222200-39226200	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr19:39222200-39226800	Weak transcription	Brain Substantia Nigra	brain
13	chr19:39222400-39225400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr19:39222400-39226200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr19:39222400-39226600	Weak transcription	Brain Cingulate Gyrus	brain
16	chr19:39222400-39226800	Weak transcription	Brain Angular Gyrus	brain
17	chr19:39222400-39226800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr19:39222600-39225200	Enhancers	Rectal Mucosa Donor 29	rectum
19	chr19:39222600-39225600	Enhancers	Skeletal Muscle Male	skeletal muscle
20	chr19:39222600-39225800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr19:39222600-39226800	Weak transcription	Fetal Heart	heart
22	chr19:39222600-39227200	Weak transcription	Fetal Kidney	kidney
23	chr19:39222800-39225200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr19:39222800-39225200	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr19:39222800-39225200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr19:39222800-39225200	Weak transcription	Rectal Smooth Muscle	rectum
27	chr19:39222800-39225200	Enhancers	Spleen	Spleen
28	chr19:39222800-39225400	Weak transcription	HUES64 Cell Line	embryonic stem cell
29	chr19:39222800-39226600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr19:39222800-39226600	Weak transcription	Brain Hippocampus Middle	brain
31	chr19:39222800-39226800	Weak transcription	Brain Anterior Caudate	brain
32	chr19:39222800-39226800	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr19:39222800-39227400	Weak transcription	Aorta	Aorta
34	chr19:39223000-39225800	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr19:39223000-39226600	Enhancers	Right Ventricle	heart
36	chr19:39223200-39225200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr19:39223200-39226800	Enhancers	Adipose Nuclei	Adipose
38	chr19:39223400-39225200	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr19:39223400-39225200	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr19:39223400-39225200	Enhancers	Esophagus	oesophagus
41	chr19:39223400-39225800	Enhancers	Sigmoid Colon	Sigmoid Colon
42	chr19:39223400-39226000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr19:39223600-39225200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr19:39223600-39225200	Enhancers	iPS-15b Cell Line	embryonic stem cell
45	chr19:39223600-39225200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr19:39223600-39226000	Enhancers	Liver	Liver
47	chr19:39223600-39226600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr19:39223600-39226600	Weak transcription	Ovary	ovary
49	chr19:39223600-39227200	Weak transcription	Fetal Lung	lung
50	chr19:39223800-39225200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

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