Variant report

Variant rs3786840
Chromosome Location chr19:39182692-39182693
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39164400-39200200 Genic enhancers Fetal Intestine Small intestine
2 chr19:39164800-39183800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr19:39170000-39183400 Enhancers Placenta Placenta
4 chr19:39174800-39182800 Weak transcription Dnd41 blood
5 chr19:39175600-39182800 Genic enhancers NHEK skin
6 chr19:39176800-39182800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr19:39177000-39183000 Weak transcription Fetal Brain Female brain
8 chr19:39177200-39195000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr19:39177400-39183400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr19:39177600-39182800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr19:39177600-39182800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:39177600-39182800 Weak transcription Primary T cells from cord blood blood
13 chr19:39177800-39182800 Weak transcription H1 Cell Line embryonic stem cell
14 chr19:39178000-39183600 Genic enhancers Muscle Satellite Cultured Cells --
15 chr19:39178600-39183200 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr19:39178600-39187800 Enhancers Left Ventricle heart
17 chr19:39178600-39190600 Enhancers Skeletal Muscle Female skeletal muscle
18 chr19:39178600-39198200 Genic enhancers Fetal Intestine Large intestine
19 chr19:39179000-39189400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr19:39179400-39184400 Enhancers Placenta Amnion Placenta Amnion
21 chr19:39179600-39183400 Weak transcription Primary B cells from cord blood blood
22 chr19:39179600-39183600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:39179600-39205800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
24 chr19:39179800-39183800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr19:39180000-39182800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr19:39180000-39182800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr19:39180000-39182800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr19:39180000-39183200 Genic enhancers Primary hematopoietic stem cells short term culture blood
29 chr19:39180000-39183800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr19:39180000-39184800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr19:39180000-39186000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:39180000-39191600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:39180000-39192400 Genic enhancers Lung lung
34 chr19:39180200-39182800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr19:39180200-39183000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr19:39180200-39183800 Weak transcription Hela-S3 cervix
37 chr19:39180400-39183200 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr19:39180600-39183800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr19:39180600-39185000 Enhancers NHDF-Ad bronchial
40 chr19:39180800-39183600 Enhancers Monocytes-CD14+_RO01746 blood
41 chr19:39180800-39183800 Enhancers HUVEC blood vessel
42 chr19:39180800-39184800 Genic enhancers HUES6 Cell Line embryonic stem cell
43 chr19:39180800-39185000 Enhancers Pancreas Pancrea
44 chr19:39180800-39187000 Enhancers Primary T cells fromperipheralblood blood
45 chr19:39181000-39182800 Weak transcription Right Ventricle heart
46 chr19:39181000-39183000 Enhancers Brain Hippocampus Middle brain
47 chr19:39181000-39183400 Enhancers Rectal Smooth Muscle rectum
48 chr19:39181000-39183800 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr19:39181000-39183800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr19:39181000-39184200 Enhancers Primary T helper naive cells from peripheral blood blood

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