Variant report

Variant	rs34490494
Chromosome Location	chr3:94754532-94754533
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11915767	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11919062	1.00[ASN][1000 genomes]
rs11927923	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1432467	1.00[ASN][1000 genomes]
rs1432470	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16853213	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1897462	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2217599	1.00[ASN][1000 genomes]
rs28589479	1.00[ASN][1000 genomes]
rs441713	1.00[ASN][1000 genomes]
rs55873906	1.00[ASN][1000 genomes]
rs56976797	1.00[ASN][1000 genomes]
rs57467432	1.00[ASN][1000 genomes]
rs58255697	1.00[ASN][1000 genomes]
rs58384132	1.00[ASN][1000 genomes]
rs61005216	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61562444	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6437608	0.84[EUR][1000 genomes]
rs73178292	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73179469	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73179470	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73180219	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73181203	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73847083	1.00[ASN][1000 genomes]
rs73847087	1.00[ASN][1000 genomes]
rs7613024	1.00[ASN][1000 genomes]
rs7625700	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7627497	1.00[ASN][1000 genomes]
rs7631481	1.00[ASN][1000 genomes]
rs7634570	1.00[ASN][1000 genomes]
rs7647775	1.00[ASN][1000 genomes]
rs9714169	1.00[ASN][1000 genomes]
rs9811186	1.00[ASN][1000 genomes]
rs9853438	1.00[ASN][1000 genomes]
rs9878881	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877169	chr3:94675697-94840854	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:94754200-94755600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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