Variant report

Variant	rs16853213
Chromosome Location	chr3:94766122-94766123
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs11915767	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs11919062	1.00[ASN][1000 genomes]
rs11919547	0.81[EUR][1000 genomes]
rs11925508	0.81[EUR][1000 genomes]
rs11927923	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1432467	1.00[ASN][1000 genomes]
rs1432470	1.00[ASN][1000 genomes]
rs1897462	1.00[ASN][1000 genomes]
rs2217599	1.00[ASN][1000 genomes]
rs28589479	1.00[ASN][1000 genomes]
rs34490494	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs441713	1.00[ASN][1000 genomes]
rs55873906	1.00[ASN][1000 genomes]
rs56976797	1.00[ASN][1000 genomes]
rs57467432	1.00[ASN][1000 genomes]
rs58255697	1.00[ASN][1000 genomes]
rs58384132	1.00[ASN][1000 genomes]
rs61005216	1.00[ASN][1000 genomes]
rs61562444	1.00[ASN][1000 genomes]
rs6437608	0.89[EUR][1000 genomes]
rs73178274	0.84[EUR][1000 genomes]
rs73178277	0.84[EUR][1000 genomes]
rs73178279	0.84[EUR][1000 genomes]
rs73178292	1.00[ASN][1000 genomes]
rs73179469	1.00[ASN][1000 genomes]
rs73179470	1.00[ASN][1000 genomes]
rs73179483	0.81[EUR][1000 genomes]
rs73179490	0.81[EUR][1000 genomes]
rs73180219	1.00[ASN][1000 genomes]
rs73181203	1.00[ASN][1000 genomes]
rs73181209	0.84[EUR][1000 genomes]
rs73182103	0.81[EUR][1000 genomes]
rs73847083	1.00[ASN][1000 genomes]
rs73847087	1.00[ASN][1000 genomes]
rs7613024	1.00[ASN][1000 genomes]
rs7625489	0.84[EUR][1000 genomes]
rs7625700	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs7627497	1.00[ASN][1000 genomes]
rs7631481	1.00[ASN][1000 genomes]
rs7634570	1.00[ASN][1000 genomes]
rs7647775	1.00[ASN][1000 genomes]
rs9714169	1.00[ASN][1000 genomes]
rs9811186	1.00[ASN][1000 genomes]
rs9853438	1.00[ASN][1000 genomes]
rs9878881	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877169	chr3:94675697-94840854	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv590993	chr3:94759504-94841342	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:94760600-94767000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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