Variant report
| Variant | rs57467432 |
|---|---|
| Chromosome Location | chr3:94641377-94641378 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000234629 | Chromatin interaction |
| ENSG00000239589 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs11919062 | 1.00[ASN][1000 genomes] |
| rs11927923 | 1.00[ASN][1000 genomes] |
| rs1432467 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1432470 | 1.00[ASN][1000 genomes] |
| rs16853213 | 1.00[ASN][1000 genomes] |
| rs1897462 | 1.00[ASN][1000 genomes] |
| rs2217599 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28589479 | 1.00[ASN][1000 genomes] |
| rs34490494 | 1.00[ASN][1000 genomes] |
| rs441713 | 1.00[ASN][1000 genomes] |
| rs55873906 | 1.00[ASN][1000 genomes] |
| rs56976797 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs58255697 | 1.00[ASN][1000 genomes] |
| rs58384132 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61005216 | 1.00[ASN][1000 genomes] |
| rs61562444 | 1.00[ASN][1000 genomes] |
| rs73178292 | 1.00[ASN][1000 genomes] |
| rs73179469 | 1.00[ASN][1000 genomes] |
| rs73179470 | 1.00[ASN][1000 genomes] |
| rs73180219 | 1.00[ASN][1000 genomes] |
| rs73181203 | 1.00[ASN][1000 genomes] |
| rs73847083 | 1.00[ASN][1000 genomes] |
| rs73847087 | 1.00[ASN][1000 genomes] |
| rs7613024 | 1.00[ASN][1000 genomes] |
| rs7625700 | 1.00[ASN][1000 genomes] |
| rs7627497 | 1.00[ASN][1000 genomes] |
| rs7631481 | 1.00[ASN][1000 genomes] |
| rs7634570 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7642941 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7647775 | 1.00[ASN][1000 genomes] |
| rs9714169 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9811186 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9853438 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9878881 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv460764 | chr3:94479849-94654181 | ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS | TF binding regionChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
| 2 | nsv590989 | chr3:94479849-94654181 | Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS | TF binding regionChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
