Variant report

Variant	rs34663304
Chromosome Location	chr3:157074822-157074823
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:157073593..157075630-chr3:157078223..157080288,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10440022	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12634613	0.87[EUR][1000 genomes]
rs12696046	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13060940	0.83[EUR][1000 genomes]
rs13072252	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13072425	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13076599	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13077564	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13078493	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13083863	0.94[EUR][1000 genomes]
rs13090731	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13093524	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13316165	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13319063	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13319093	0.83[EUR][1000 genomes]
rs13321401	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13325320	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13326278	0.83[EUR][1000 genomes]
rs13326287	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16827382	0.87[EUR][1000 genomes]
rs28513929	0.83[EUR][1000 genomes]
rs28671546	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34154019	0.83[EUR][1000 genomes]
rs34300533	0.83[EUR][1000 genomes]
rs34433563	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34508886	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35043399	0.94[EUR][1000 genomes]
rs35391186	0.94[EUR][1000 genomes]
rs35988323	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs3749215	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57330741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71310497	0.83[EUR][1000 genomes]
rs71310500	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs71310501	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71310502	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs71312203	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71312204	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9810648	0.82[ASN][1000 genomes]
rs9812766	0.83[EUR][1000 genomes]
rs9817490	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9821290	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9829650	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9856588	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9866141	0.83[EUR][1000 genomes]
rs9868982	0.83[EUR][1000 genomes]
rs9872817	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157066000-157076400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:157066000-157086800	Weak transcription	Pancreas	Pancrea
3	chr3:157066600-157076000	Weak transcription	NH-A	brain
4	chr3:157066600-157083200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr3:157070400-157077400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr3:157072200-157075400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr3:157072400-157077200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr3:157073000-157076000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr3:157073000-157077800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr3:157073400-157076800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr3:157073400-157076800	Weak transcription	HSMM	muscle
12	chr3:157073400-157079800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr3:157073800-157075800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr3:157074200-157075400	Enhancers	Osteobl	bone
15	chr3:157074400-157077400	Enhancers	Muscle Satellite Cultured Cells	--
16	chr3:157074600-157075200	Enhancers	A549	lung
17	chr3:157074600-157076400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr3:157074600-157076600	Weak transcription	NHLF	lung
19	chr3:157074600-157077200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr3:157074600-157077400	Enhancers	HUVEC	blood vessel
21	chr3:157074800-157076000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr3:157074800-157076600	Weak transcription	NHDF-Ad	bronchial

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