Variant report

Variant	rs35019263
Chromosome Location	chr1:211186959-211186960
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10494931	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10494932	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11119658	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119662	0.81[AFR][1000 genomes]
rs11119664	0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11578692	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11579078	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11582440	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11582507	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11583101	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11588573	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12074568	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121565	0.84[ASN][1000 genomes]
rs12722738	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12750762	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12751504	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12752336	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12756697	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12760791	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1393028	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1501558	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1501560	0.84[ASN][1000 genomes]
rs17188741	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17188748	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17188797	0.94[ASN][1000 genomes]
rs2134108	0.84[ASN][1000 genomes]
rs2221250	0.94[ASN][1000 genomes]
rs33985151	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34773128	0.84[ASN][1000 genomes]
rs34827659	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4262610	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4638187	0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56260926	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs59374111	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs61850226	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6669457	0.98[AFR][1000 genomes]
rs6683856	0.84[ASN][1000 genomes]
rs6697578	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6702598	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7414286	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7519090	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9662051	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211180600-211187000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr1:211181800-211193800	Weak transcription	Brain Anterior Caudate	brain
3	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:211184800-211198600	Weak transcription	Brain Hippocampus Middle	brain
5	chr1:211185200-211194000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr1:211185400-211191800	Weak transcription	HSMMtube	muscle
7	chr1:211186400-211187200	Enhancers	NHDF-Ad	bronchial
8	chr1:211186600-211187400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr1:211186600-211187400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:211186600-211187400	Enhancers	Osteobl	bone
11	chr1:211186600-211189600	Genic enhancers	HSMM	muscle
12	chr1:211186800-211187000	Enhancers	Brain Angular Gyrus	brain
13	chr1:211186800-211189200	Enhancers	Muscle Satellite Cultured Cells	--

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