Variant report

Variant rs35140844
Chromosome Location chr19:53382371-53382372
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53361800-53383800 Weak transcription Brain Cingulate Gyrus brain
2 chr19:53376000-53383200 Weak transcription Brain Substantia Nigra brain
3 chr19:53377200-53383400 Weak transcription Brain Germinal Matrix brain
4 chr19:53377800-53383600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr19:53379000-53383400 Weak transcription Fetal Kidney kidney
6 chr19:53379000-53383800 Weak transcription Fetal Brain Male brain
7 chr19:53379800-53388600 ZNF genes & repeats Liver Liver
8 chr19:53380200-53390200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr19:53380400-53383600 Weak transcription Hela-S3 cervix
10 chr19:53380400-53391000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:53380400-53391200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:53380400-53391200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
13 chr19:53380400-53391200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
14 chr19:53380400-53398800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr19:53380600-53390200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr19:53380600-53397200 Strong transcription Fetal Brain Female brain
17 chr19:53380800-53384000 Weak transcription Fetal Heart heart
18 chr19:53381000-53383600 Strong transcription Skeletal Muscle Male skeletal muscle
19 chr19:53381000-53384200 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr19:53381200-53384000 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr19:53381200-53386000 ZNF genes & repeats Primary T cells from cord blood blood
22 chr19:53381200-53388800 ZNF genes & repeats Duodenum Mucosa Duodenum
23 chr19:53381400-53384600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr19:53381600-53382400 ZNF genes & repeats Fetal Intestine Small intestine
25 chr19:53381600-53383600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
26 chr19:53381600-53383800 ZNF genes & repeats Fetal Intestine Large intestine
27 chr19:53381600-53384800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
28 chr19:53381600-53394400 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr19:53381800-53382400 ZNF genes & repeats H1 Cell Line embryonic stem cell
30 chr19:53381800-53382400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr19:53381800-53382400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:53381800-53382400 Strong transcription Brain Anterior Caudate brain
33 chr19:53381800-53382400 ZNF genes & repeats Gastric stomach
34 chr19:53381800-53382400 ZNF genes & repeats Lung lung
35 chr19:53381800-53382400 Strong transcription Psoas Muscle Psoas
36 chr19:53381800-53382400 Strong transcription HSMMtube muscle
37 chr19:53381800-53382600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:53381800-53382600 ZNF genes & repeats Colonic Mucosa Colon
39 chr19:53381800-53382600 Strong transcription Fetal Muscle Leg muscle
40 chr19:53381800-53382600 Strong transcription Left Ventricle heart
41 chr19:53381800-53382800 ZNF genes & repeats NH-A brain
42 chr19:53381800-53382800 ZNF genes & repeats NHEK skin
43 chr19:53381800-53383600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr19:53381800-53383600 Strong transcription Fetal Muscle Trunk muscle
45 chr19:53381800-53383800 ZNF genes & repeats Fetal Thymus thymus
46 chr19:53381800-53384200 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:53381800-53384400 Strong transcription Brain Angular Gyrus brain
48 chr19:53381800-53385800 Strong transcription Placenta Placenta
49 chr19:53381800-53386200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
50 chr19:53381800-53386200 ZNF genes & repeats Muscle Satellite Cultured Cells --

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