The 2.0 version of rSNPBase

Variant report

Variant rs35202
Chromosome Location chr16:65019326-65019327
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:64991400-65032600 Weak transcription Rectal Smooth Muscle rectum
2 chr16:64998000-65024800 Strong transcription Breast Myoepithelial Primary Cells Breast
3 chr16:65000800-65051000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr16:65003400-65034000 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr16:65004800-65027600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr16:65006600-65020600 Weak transcription Brain Germinal Matrix brain
7 chr16:65006600-65021000 Weak transcription Placenta Amnion Placenta Amnion
8 chr16:65006600-65024800 Weak transcription Spleen Spleen
9 chr16:65007000-65020200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr16:65007000-65020800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr16:65008600-65024000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr16:65014200-65040200 Weak transcription Fetal Intestine Small intestine
13 chr16:65014400-65020200 Weak transcription NHLF lung
14 chr16:65015000-65020600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr16:65015000-65035000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr16:65016000-65020400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr16:65016000-65020800 Weak transcription Fetal Intestine Large intestine
18 chr16:65016200-65019400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr16:65016200-65019400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr16:65016200-65020200 Weak transcription Aorta Aorta
21 chr16:65016200-65021600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr16:65016200-65025000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr16:65016200-65032400 Weak transcription Lung lung
24 chr16:65016200-65040200 Weak transcription Left Ventricle heart
25 chr16:65016600-65020400 Weak transcription Stomach Smooth Muscle stomach
26 chr16:65016800-65020400 Weak transcription Muscle Satellite Cultured Cells --
27 chr16:65016800-65021400 Weak transcription HMEC breast
28 chr16:65017000-65021800 Weak transcription Fetal Kidney kidney
29 chr16:65017200-65041800 Weak transcription Colon Smooth Muscle Colon
30 chr16:65017400-65020400 Weak transcription Fetal Brain Female brain
31 chr16:65018000-65019400 Weak transcription Fetal Muscle Leg muscle
32 chr16:65018000-65020200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr16:65018000-65020800 Weak transcription Brain Angular Gyrus brain
34 chr16:65018000-65021000 Weak transcription Fetal Heart heart
35 chr16:65018000-65024000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr16:65018000-65025400 Weak transcription Small Intestine intestine
37 chr16:65018000-65035600 Strong transcription HSMM muscle
38 chr16:65018200-65019400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr16:65018200-65019600 Weak transcription HSMMtube muscle
40 chr16:65018200-65019800 Weak transcription Fetal Brain Male brain
41 chr16:65018200-65020200 Weak transcription Brain Hippocampus Middle brain
42 chr16:65018200-65020800 Weak transcription Brain Substantia Nigra brain
43 chr16:65018200-65020800 Weak transcription Placenta Placenta
44 chr16:65018200-65021000 Weak transcription Brain Cingulate Gyrus brain
45 chr16:65018200-65025000 Strong transcription Ovary ovary
46 chr16:65018400-65019600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr16:65018400-65020400 Weak transcription Fetal Stomach stomach
48 chr16:65018400-65020800 Weak transcription Brain Anterior Caudate brain
49 chr16:65018400-65021800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr16:65018400-65023000 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015