The 2.0 version of rSNPBase

Variant report

Variant rs35953900
Chromosome Location chr6:37863749-37863750
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37846000-37865200 Weak transcription Thymus Thymus
2 chr6:37850600-37865800 Weak transcription HSMMtube muscle
3 chr6:37850600-37869200 Weak transcription Lung lung
4 chr6:37850600-37890400 Weak transcription Primary B cells from cord blood blood
5 chr6:37850800-37865200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:37851000-37866000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:37851000-37868800 Weak transcription Ovary ovary
8 chr6:37851000-37869200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:37851000-37884600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:37855600-37865000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:37856000-37871000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr6:37857000-37865200 Weak transcription HepG2 liver
13 chr6:37857200-37865000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr6:37857200-37865000 Weak transcription Rectal Smooth Muscle rectum
15 chr6:37857200-37871200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr6:37857200-37871200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr6:37857200-37871400 Weak transcription Aorta Aorta
18 chr6:37857400-37865000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:37857400-37871800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr6:37857600-37871800 Weak transcription Right Atrium heart
21 chr6:37857600-37871800 Weak transcription Stomach Mucosa stomach
22 chr6:37857600-37872200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:37857600-37886000 Weak transcription Esophagus oesophagus
24 chr6:37857600-37895400 Weak transcription Pancreas Pancrea
25 chr6:37857800-37864400 Weak transcription NH-A brain
26 chr6:37858000-37877600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr6:37858200-37864400 Weak transcription Psoas Muscle Psoas
28 chr6:37858200-37869400 Weak transcription Left Ventricle heart
29 chr6:37858200-37871200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr6:37858400-37864000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:37858400-37864000 Weak transcription NHEK skin
32 chr6:37858800-37864400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:37859000-37864400 Weak transcription HMEC breast
34 chr6:37859000-37865000 Weak transcription Brain Cingulate Gyrus brain
35 chr6:37859200-37864000 Weak transcription A549 lung
36 chr6:37861200-37865000 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr6:37861200-37865400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr6:37861600-37865000 Weak transcription Hela-S3 cervix
39 chr6:37862000-37871800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr6:37862000-37877000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:37862400-37864200 Weak transcription Placenta Placenta
42 chr6:37862400-37864400 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr6:37862400-37865400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr6:37862400-37877200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr6:37862400-37884000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:37862600-37865000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr6:37862600-37865000 Weak transcription Primary T cells from cord blood blood
48 chr6:37862600-37868800 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr6:37862600-37871800 Weak transcription Primary hematopoietic stem cells blood
50 chr6:37862600-37882000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015