The 2.0 version of rSNPBase

Variant report

Variant rs35984090
Chromosome Location chr6:64383402-64383403
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64347000-64422400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:64347800-64386400 Weak transcription Colonic Mucosa Colon
3 chr6:64351200-64385000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:64351200-64405000 Weak transcription Thymus Thymus
5 chr6:64354000-64421200 Weak transcription Gastric stomach
6 chr6:64354200-64383600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr6:64357800-64393400 Weak transcription Placenta Placenta
8 chr6:64365200-64387000 Weak transcription Primary monocytes fromperipheralblood blood
9 chr6:64365400-64386400 Weak transcription Spleen Spleen
10 chr6:64365800-64409400 Weak transcription Fetal Stomach stomach
11 chr6:64370800-64395000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:64370800-64413400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr6:64371000-64394200 Weak transcription Stomach Smooth Muscle stomach
14 chr6:64371000-64409000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr6:64373800-64384600 Weak transcription Adipose Nuclei Adipose
16 chr6:64373800-64386400 Weak transcription Pancreas Pancrea
17 chr6:64373800-64394200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:64373800-64394600 Weak transcription HSMMtube muscle
19 chr6:64373800-64394800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr6:64374000-64384400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr6:64374000-64384600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr6:64374000-64384800 Weak transcription Brain Cingulate Gyrus brain
23 chr6:64374000-64386200 Weak transcription NHDF-Ad bronchial
24 chr6:64374000-64387200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:64374000-64391600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:64374200-64384400 Weak transcription Brain Hippocampus Middle brain
27 chr6:64374200-64384400 Weak transcription Colon Smooth Muscle Colon
28 chr6:64374200-64385400 Weak transcription Brain Anterior Caudate brain
29 chr6:64374200-64386400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:64374200-64386400 Weak transcription Right Atrium heart
31 chr6:64374200-64387000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:64374200-64393400 Weak transcription HSMM muscle
33 chr6:64374200-64394000 Weak transcription NH-A brain
34 chr6:64374200-64394200 Weak transcription Muscle Satellite Cultured Cells --
35 chr6:64374200-64405800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr6:64374200-64414600 Weak transcription HMEC breast
37 chr6:64374400-64384600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr6:64374400-64385400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:64374400-64388800 Weak transcription K562 blood
40 chr6:64375600-64409000 Weak transcription Placenta Amnion Placenta Amnion
41 chr6:64375800-64386400 Weak transcription Left Ventricle heart
42 chr6:64375800-64388600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr6:64377000-64394000 Weak transcription Fetal Muscle Trunk muscle
44 chr6:64378600-64386800 Weak transcription Aorta Aorta
45 chr6:64379200-64388800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:64379400-64386800 Weak transcription Fetal Kidney kidney
47 chr6:64379600-64385200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr6:64380600-64389400 Enhancers Primary T helper cells fromperipheralblood blood
49 chr6:64381000-64383800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr6:64381000-64383800 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015