Variant report

Variant	rs3732791
Chromosome Location	chr3:113847689-113847690
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10934262	1.00[JPT][hapmap]
rs1354348	1.00[JPT][hapmap]
rs1486008	1.00[JPT][hapmap]
rs16822393	1.00[JPT][hapmap]
rs2251177	1.00[GIH][hapmap]
rs2654754	1.00[JPT][hapmap]
rs2654762	1.00[GIH][hapmap]
rs2654763	1.00[JPT][hapmap]
rs324041	1.00[GIH][hapmap]
rs3732783	1.00[JPT][hapmap]
rs4682534	1.00[JPT][hapmap]
rs9288991	1.00[JPT][hapmap]
rs9824856	1.00[JPT][hapmap]
rs9825085	1.00[GIH][hapmap]
rs9859762	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877352	chr3:113744010-113870078	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv877353	chr3:113789029-113879562	Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:113846600-113848600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr3:113846800-113847800	Enhancers	HUVEC	blood vessel
3	chr3:113847000-113847800	Enhancers	NH-A	brain
4	chr3:113847000-113847800	Enhancers	Osteobl	bone
5	chr3:113847200-113847800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr3:113847400-113847800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr3:113847400-113847800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr3:113847400-113847800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr3:113847400-113847800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr3:113847400-113847800	Enhancers	Hela-S3	cervix
11	chr3:113847400-113847800	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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