The 2.0 version of rSNPBase

Variant report

Variant rs376547
Chromosome Location chr1:212468171-212468172
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212460200-212489200 Weak transcription Spleen Spleen
2 chr1:212461000-212469000 Enhancers Brain Substantia Nigra brain
3 chr1:212461000-212476200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:212461600-212468800 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:212461800-212470200 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr1:212462000-212471200 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr1:212462200-212468800 Enhancers Brain Anterior Caudate brain
8 chr1:212462200-212471000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr1:212462200-212471000 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr1:212462400-212469000 Enhancers Brain Cingulate Gyrus brain
11 chr1:212462600-212471000 Enhancers Primary T helper cells fromperipheralblood blood
12 chr1:212462800-212470000 Enhancers Liver Liver
13 chr1:212463600-212468800 Weak transcription Thymus Thymus
14 chr1:212463800-212471000 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr1:212463800-212471000 Enhancers Primary T helper cells PMA-I stimulated --
16 chr1:212464200-212471200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr1:212464200-212483000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:212464600-212473000 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:212464800-212468600 Weak transcription Gastric stomach
20 chr1:212464800-212480200 Weak transcription Lung lung
21 chr1:212464800-212483800 Weak transcription Pancreas Pancrea
22 chr1:212464800-212506400 Weak transcription Esophagus oesophagus
23 chr1:212465000-212468200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:212465000-212468800 Weak transcription Colonic Mucosa Colon
25 chr1:212465000-212469600 Enhancers Adipose Nuclei Adipose
26 chr1:212465000-212470400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:212465000-212474800 Weak transcription Osteobl bone
28 chr1:212465000-212480200 Weak transcription Primary hematopoietic stem cells blood
29 chr1:212465200-212468200 Weak transcription Right Ventricle heart
30 chr1:212465200-212468400 Weak transcription Hela-S3 cervix
31 chr1:212465400-212468200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:212465400-212475000 Weak transcription Rectal Smooth Muscle rectum
33 chr1:212465400-212482800 Weak transcription Fetal Lung lung
34 chr1:212465800-212483200 Weak transcription Dnd41 blood
35 chr1:212466000-212468200 Weak transcription Brain Angular Gyrus brain
36 chr1:212466200-212468200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:212466200-212468200 Weak transcription Fetal Intestine Small intestine
38 chr1:212466200-212468200 Weak transcription Left Ventricle heart
39 chr1:212466200-212468200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:212466200-212468400 Enhancers Primary T cells from cord blood blood
41 chr1:212466200-212468400 Weak transcription Right Atrium heart
42 chr1:212466200-212468600 Weak transcription Small Intestine intestine
43 chr1:212466200-212470400 Enhancers Primary neutrophils fromperipheralblood blood
44 chr1:212466200-212470600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:212466200-212473000 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:212466200-212506400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:212466400-212468200 Weak transcription Psoas Muscle Psoas
48 chr1:212466400-212468600 Weak transcription Aorta Aorta
49 chr1:212466400-212470200 Weak transcription Primary B cells from peripheral blood blood
50 chr1:212466600-212468200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015