The 2.0 version of rSNPBase

Variant report

Variant rs72754308
Chromosome Location chr1:212533082-212533083
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212489600-212554800 Weak transcription Small Intestine intestine
2 chr1:212493800-212533400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:212500000-212540400 Weak transcription Stomach Mucosa stomach
4 chr1:212501000-212533600 Weak transcription Fetal Heart heart
5 chr1:212501400-212540800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:212501800-212540800 Strong transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:212502600-212563400 Strong transcription Primary monocytes fromperipheralblood blood
8 chr1:212502600-212564600 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr1:212502800-212541400 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr1:212504000-212548600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:212504400-212537600 Weak transcription Psoas Muscle Psoas
12 chr1:212505800-212533200 Weak transcription NH-A brain
13 chr1:212508200-212545800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:212508600-212541000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:212511400-212540800 Strong transcription Primary T cells fromperipheralblood blood
16 chr1:212513200-212541000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:212513800-212540800 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr1:212514400-212540400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:212514600-212537600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:212514800-212541800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:212515200-212536400 Strong transcription Liver Liver
22 chr1:212523600-212550600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:212524000-212541800 Strong transcription Fetal Thymus thymus
24 chr1:212524400-212554600 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:212525000-212541600 Strong transcription Primary T helper cells PMA-I stimulated --
26 chr1:212525400-212536600 Strong transcription Primary B cells from cord blood blood
27 chr1:212525600-212541800 Strong transcription Primary B cells from peripheral blood blood
28 chr1:212525600-212545600 Strong transcription Primary T cells from cord blood blood
29 chr1:212526600-212535000 Weak transcription Fetal Brain Female brain
30 chr1:212526600-212540600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:212526600-212540800 Weak transcription Right Ventricle heart
32 chr1:212526800-212538200 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:212526800-212538400 Weak transcription Aorta Aorta
34 chr1:212526800-212540600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:212526800-212541200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr1:212526800-212549200 Weak transcription Brain Germinal Matrix brain
37 chr1:212526800-212550800 Weak transcription HSMMtube muscle
38 chr1:212526800-212582800 Weak transcription Fetal Brain Male brain
39 chr1:212527800-212534400 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:212527800-212538400 Weak transcription Lung lung
41 chr1:212528000-212535400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:212528000-212540600 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr1:212528200-212536200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:212528400-212537400 Weak transcription Spleen Spleen
45 chr1:212528400-212583000 Weak transcription Fetal Kidney kidney
46 chr1:212529000-212550800 Weak transcription NHLF lung
47 chr1:212529200-212535800 Strong transcription HepG2 liver
48 chr1:212529200-212536200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:212529400-212536200 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr1:212529400-212536400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015