The 2.0 version of rSNPBase

Variant report

Variant rs12073991
Chromosome Location chr1:212539559-212539560
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212489600-212554800 Weak transcription Small Intestine intestine
2 chr1:212500000-212540400 Weak transcription Stomach Mucosa stomach
3 chr1:212501400-212540800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:212501800-212540800 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:212502600-212563400 Strong transcription Primary monocytes fromperipheralblood blood
6 chr1:212502600-212564600 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr1:212502800-212541400 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr1:212504000-212548600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:212508200-212545800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:212508600-212541000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:212511400-212540800 Strong transcription Primary T cells fromperipheralblood blood
12 chr1:212513200-212541000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:212513800-212540800 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr1:212514400-212540400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:212514800-212541800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:212523600-212550600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:212524000-212541800 Strong transcription Fetal Thymus thymus
18 chr1:212524400-212554600 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:212525000-212541600 Strong transcription Primary T helper cells PMA-I stimulated --
20 chr1:212525600-212541800 Strong transcription Primary B cells from peripheral blood blood
21 chr1:212525600-212545600 Strong transcription Primary T cells from cord blood blood
22 chr1:212526600-212540600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:212526600-212540800 Weak transcription Right Ventricle heart
24 chr1:212526800-212540600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:212526800-212541200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:212526800-212549200 Weak transcription Brain Germinal Matrix brain
27 chr1:212526800-212550800 Weak transcription HSMMtube muscle
28 chr1:212526800-212582800 Weak transcription Fetal Brain Male brain
29 chr1:212528000-212540600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr1:212528400-212583000 Weak transcription Fetal Kidney kidney
31 chr1:212529000-212550800 Weak transcription NHLF lung
32 chr1:212529400-212541200 Strong transcription GM12878-XiMat blood
33 chr1:212529400-212562400 Strong transcription Dnd41 blood
34 chr1:212529600-212540400 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr1:212529600-212541600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:212529800-212540400 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr1:212529800-212541000 Strong transcription iPS-20b Cell Line embryonic stem cell
38 chr1:212529800-212541600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:212529800-212563200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr1:212530000-212540400 Strong transcription iPS-18 Cell Line embryonic stem cell
41 chr1:212530200-212552600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:212531200-212542200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:212531400-212540400 Strong transcription HUVEC blood vessel
44 chr1:212531600-212550000 Weak transcription Pancreas Pancrea
45 chr1:212531800-212550400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:212532000-212548600 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr1:212532200-212550400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:212532400-212560200 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:212533400-212557000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr1:212533600-212542200 Strong transcription Thymus Thymus

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Last update: Aug 31, 2015