The 2.0 version of rSNPBase

Variant report

Variant rs7544944
Chromosome Location chr1:212464042-212464043
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212460200-212489200 Weak transcription Spleen Spleen
2 chr1:212460800-212464400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:212461000-212464400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:212461000-212464600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:212461000-212464600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:212461000-212464600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:212461000-212464800 Weak transcription Placenta Placenta
8 chr1:212461000-212466000 Enhancers Colon Smooth Muscle Colon
9 chr1:212461000-212469000 Enhancers Brain Substantia Nigra brain
10 chr1:212461000-212476200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:212461200-212466600 Enhancers NHEK skin
12 chr1:212461200-212467200 Enhancers HMEC breast
13 chr1:212461400-212464400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
14 chr1:212461600-212464400 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr1:212461600-212465400 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr1:212461600-212465600 Flanking Active TSS Primary T cells from cord blood blood
17 chr1:212461600-212468800 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:212461800-212464400 Weak transcription Esophagus oesophagus
19 chr1:212461800-212464400 Weak transcription Fetal Muscle Trunk muscle
20 chr1:212461800-212464400 Weak transcription Fetal Muscle Leg muscle
21 chr1:212461800-212464400 Weak transcription Fetal Thymus thymus
22 chr1:212461800-212464400 Weak transcription Gastric stomach
23 chr1:212461800-212464400 Weak transcription Lung lung
24 chr1:212461800-212464400 Weak transcription Pancreas Pancrea
25 chr1:212461800-212464600 Weak transcription Colonic Mucosa Colon
26 chr1:212461800-212464800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:212461800-212465000 Enhancers NHLF lung
28 chr1:212461800-212470200 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr1:212462000-212465200 Enhancers Hela-S3 cervix
30 chr1:212462000-212465400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr1:212462000-212465400 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr1:212462000-212471200 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr1:212462200-212464400 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:212462200-212464400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:212462200-212464600 Enhancers Brain Hippocampus Middle brain
36 chr1:212462200-212465400 Enhancers Fetal Lung lung
37 chr1:212462200-212466000 Enhancers HepG2 liver
38 chr1:212462200-212466600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:212462200-212467200 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:212462200-212468800 Enhancers Brain Anterior Caudate brain
41 chr1:212462200-212471000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr1:212462200-212471000 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr1:212462400-212464200 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr1:212462400-212464400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:212462400-212466000 Enhancers A549 lung
46 chr1:212462400-212466200 Enhancers Duodenum Smooth Muscle Duodenum
47 chr1:212462400-212466600 Enhancers Primary monocytes fromperipheralblood blood
48 chr1:212462400-212467200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:212462400-212469000 Enhancers Brain Cingulate Gyrus brain
50 chr1:212462600-212464200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015