The 2.0 version of rSNPBase

Variant report

Variant rs7527666
Chromosome Location chr1:212431266-212431267
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212428200-212431800 Enhancers Pancreas Pancrea
2 chr1:212428600-212434000 Weak transcription Esophagus oesophagus
3 chr1:212428800-212434000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:212429200-212434200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:212429200-212434400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:212429400-212431600 Enhancers Liver Liver
7 chr1:212429400-212432600 Weak transcription Brain Angular Gyrus brain
8 chr1:212429400-212434000 Weak transcription Stomach Mucosa stomach
9 chr1:212429400-212434800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:212429400-212435600 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:212429600-212433000 Enhancers Primary T helper cells fromperipheralblood blood
12 chr1:212429600-212434000 Weak transcription Fetal Intestine Large intestine
13 chr1:212429600-212434200 Weak transcription Duodenum Mucosa Duodenum
14 chr1:212429800-212431400 Enhancers Primary T helper cells PMA-I stimulated --
15 chr1:212429800-212432400 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr1:212429800-212434000 Weak transcription K562 blood
17 chr1:212430000-212431400 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr1:212430000-212431600 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr1:212430000-212431600 Weak transcription Small Intestine intestine
20 chr1:212430000-212431800 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr1:212430000-212433600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:212430000-212433800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:212430200-212431400 Weak transcription Gastric stomach
24 chr1:212430200-212433200 Enhancers Primary T cells from cord blood blood
25 chr1:212430200-212434600 Weak transcription Left Ventricle heart
26 chr1:212430400-212431400 Enhancers Primary hematopoietic stem cells blood
27 chr1:212430400-212435600 Enhancers HepG2 liver
28 chr1:212430600-212431400 Enhancers Primary B cells from cord blood blood
29 chr1:212430600-212431600 Weak transcription Thymus Thymus
30 chr1:212430600-212434000 Weak transcription Lung lung
31 chr1:212430600-212435000 Enhancers Adipose Nuclei Adipose
32 chr1:212430800-212434000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr1:212430800-212434400 Weak transcription Right Atrium heart
34 chr1:212430800-212434400 Weak transcription Right Ventricle heart
35 chr1:212431000-212431800 Enhancers Monocytes-CD14+_RO01746 blood
36 chr1:212431000-212432200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr1:212431000-212434000 Enhancers Primary neutrophils fromperipheralblood blood
38 chr1:212431000-212434200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:212431200-212431800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:212431200-212434000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015