Variant report
| Variant | rs11804839 |
|---|---|
| Chromosome Location | chr1:212545655-212545656 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:212489600-212554800 | Weak transcription | Small Intestine | intestine |
| 2 | chr1:212502600-212563400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 3 | chr1:212502600-212564600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 4 | chr1:212504000-212548600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 5 | chr1:212508200-212545800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 6 | chr1:212523600-212550600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr1:212524400-212554600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr1:212526800-212549200 | Weak transcription | Brain Germinal Matrix | brain |
| 9 | chr1:212526800-212550800 | Weak transcription | HSMMtube | muscle |
| 10 | chr1:212526800-212582800 | Weak transcription | Fetal Brain Male | brain |
| 11 | chr1:212528400-212583000 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr1:212529000-212550800 | Weak transcription | NHLF | lung |
| 13 | chr1:212529400-212562400 | Strong transcription | Dnd41 | blood |
| 14 | chr1:212529800-212563200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 15 | chr1:212530200-212552600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr1:212531600-212550000 | Weak transcription | Pancreas | Pancrea |
| 17 | chr1:212531800-212550400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr1:212532000-212548600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 19 | chr1:212532200-212550400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 20 | chr1:212532400-212560200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 21 | chr1:212533400-212557000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 22 | chr1:212533800-212552800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 23 | chr1:212534000-212558200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 24 | chr1:212534000-212570200 | Weak transcription | HSMM | muscle |
| 25 | chr1:212534400-212570600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 26 | chr1:212534600-212560000 | Weak transcription | Colon Smooth Muscle | Colon |
| 27 | chr1:212535000-212552800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 28 | chr1:212535000-212561400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 29 | chr1:212535200-212560200 | Weak transcription | Hela-S3 | cervix |
| 30 | chr1:212536200-212550400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 31 | chr1:212536200-212550600 | Weak transcription | Brain Angular Gyrus | brain |
| 32 | chr1:212536200-212561600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr1:212536600-212549400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 34 | chr1:212536600-212552800 | Weak transcription | HMEC | breast |
| 35 | chr1:212537800-212551600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 36 | chr1:212538000-212546200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 37 | chr1:212538000-212571000 | Weak transcription | NH-A | brain |
| 38 | chr1:212538200-212546400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr1:212538200-212550600 | Weak transcription | Placenta | Placenta |
| 40 | chr1:212538200-212559600 | Weak transcription | Right Atrium | heart |
| 41 | chr1:212538600-212548600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 42 | chr1:212538600-212550000 | Weak transcription | Colonic Mucosa | Colon |
| 43 | chr1:212538600-212550400 | Weak transcription | Ovary | ovary |
| 44 | chr1:212538800-212546800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 45 | chr1:212538800-212549400 | Weak transcription | Gastric | stomach |
| 46 | chr1:212539400-212548600 | Weak transcription | Esophagus | oesophagus |
| 47 | chr1:212539400-212549400 | Weak transcription | Aorta | Aorta |
| 48 | chr1:212539600-212550800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 49 | chr1:212540000-212549400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr1:212540200-212550400 | Weak transcription | Left Ventricle | heart |
