Variant report

Variant rs3925058
Chromosome Location chr1:47797623-47797624
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47780200-47798400 Weak transcription Spleen Spleen
2 chr1:47780600-47798000 Weak transcription HSMMtube muscle
3 chr1:47780800-47797800 Weak transcription Fetal Muscle Leg muscle
4 chr1:47790600-47797800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:47791800-47798200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:47792400-47797800 Weak transcription Duodenum Mucosa Duodenum
7 chr1:47792600-47798000 Weak transcription Brain Hippocampus Middle brain
8 chr1:47792600-47798400 Weak transcription Primary T cells from cord blood blood
9 chr1:47792800-47798600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:47793200-47797800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:47793600-47798000 Weak transcription Left Ventricle heart
12 chr1:47794000-47798200 Weak transcription Ovary ovary
13 chr1:47794200-47797800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:47794200-47798000 Weak transcription Liver Liver
15 chr1:47794600-47798000 Weak transcription Colon Smooth Muscle Colon
16 chr1:47794800-47798000 Weak transcription Fetal Brain Male brain
17 chr1:47795200-47797800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:47795200-47798200 Weak transcription Brain Cingulate Gyrus brain
19 chr1:47795200-47798200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:47795400-47797800 Weak transcription Fetal Stomach stomach
21 chr1:47795600-47798600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:47796000-47798200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:47796200-47798200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:47796600-47798000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:47796600-47798600 Enhancers Esophagus oesophagus
26 chr1:47797200-47798000 Weak transcription Pancreas Pancrea
27 chr1:47797400-47797800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:47797400-47797800 Enhancers Fetal Brain Female brain
29 chr1:47797400-47797800 Weak transcription Right Atrium heart
30 chr1:47797400-47798200 Enhancers Fetal Heart heart
31 chr1:47797400-47798400 Enhancers Fetal Intestine Large intestine
32 chr1:47797600-47797800 Enhancers Rectal Mucosa Donor 31 rectum
33 chr1:47797600-47797800 Enhancers K562 blood
34 chr1:47797600-47798000 Enhancers Brain Germinal Matrix brain
35 chr1:47797600-47798000 Enhancers HepG2 liver
36 chr1:47797600-47798200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:47797600-47798200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:47797600-47798200 Enhancers Muscle Satellite Cultured Cells --
39 chr1:47797600-47798200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:47797600-47798200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:47797600-47798200 Enhancers Fetal Intestine Small intestine
42 chr1:47797600-47799200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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