Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HIVEP2-4	chr6:143415171-143415463	ENSG00000225752.1

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12665439	0.82[EUR][1000 genomes]
rs1334478	0.83[JPT][hapmap]
rs17590726	0.83[JPT][hapmap]
rs3789782	0.89[JPT][hapmap]
rs3789783	0.86[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3804526	0.89[JPT][hapmap]
rs3804527	0.89[JPT][hapmap]
rs3804531	0.82[EUR][1000 genomes]
rs3827797	0.89[JPT][hapmap]
rs58851256	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6906195	0.82[EUR][1000 genomes]
rs6914857	0.82[EUR][1000 genomes]
rs6938207	0.89[JPT][hapmap]
rs7754388	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7771808	0.82[CHB][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7774011	0.89[JPT][hapmap]
rs7775912	0.81[CHB][hapmap];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9321887	0.89[JPT][hapmap]
rs9321888	0.89[JPT][hapmap]
rs9386021	0.82[EUR][1000 genomes]
rs9399416	0.89[JPT][hapmap]
rs9399419	0.82[EUR][1000 genomes]
rs9403434	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9403435	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9496511	0.82[CHB][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143382600-143426800	Weak transcription	Ovary	ovary
2	chr6:143386400-143431800	Weak transcription	NHEK	skin
3	chr6:143389600-143437000	Weak transcription	HSMM	muscle
4	chr6:143389800-143418800	Weak transcription	Osteobl	bone
5	chr6:143395800-143432200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:143397400-143431600	Weak transcription	HMEC	breast
7	chr6:143402200-143418400	Weak transcription	K562	blood
8	chr6:143403200-143417400	Weak transcription	Stomach Mucosa	stomach
9	chr6:143404000-143417800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr6:143404000-143422600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:143408200-143418600	Weak transcription	Left Ventricle	heart
12	chr6:143408600-143445400	Weak transcription	Aorta	Aorta
13	chr6:143408600-143452600	Weak transcription	Right Ventricle	heart
14	chr6:143408800-143417200	Weak transcription	Fetal Intestine Small	intestine
15	chr6:143412200-143416000	Weak transcription	Liver	Liver
16	chr6:143412200-143417600	Weak transcription	Primary T cells from cord blood	blood
17	chr6:143412400-143417600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr6:143412400-143420400	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr6:143414200-143419800	Weak transcription	Brain Substantia Nigra	brain
20	chr6:143415400-143416600	Enhancers	Primary neutrophils fromperipheralblood	blood

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