Variant report

Variant	rs4514768
Chromosome Location	chr18:40157251-40157252
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs3924664	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3924665	0.81[AFR][1000 genomes]
rs4243262	0.94[EUR][1000 genomes]
rs4243264	0.90[EUR][1000 genomes]
rs4629063	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4633808	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7228101	0.91[EUR][1000 genomes]
rs7229728	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7230640	0.92[EUR][1000 genomes]
rs7231626	0.93[EUR][1000 genomes]
rs7232069	0.90[EUR][1000 genomes]
rs7238529	0.92[EUR][1000 genomes]
rs9951191	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9956876	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9959682	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9964460	0.93[EUR][1000 genomes]
rs9964813	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9967058	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2754458	chr18:40070202-40164902	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40156000-40158400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr18:40156600-40158400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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