Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10775472	0.86[ASN][1000 genomes]
rs12954826	0.85[ASN][1000 genomes]
rs1431836	0.85[ASN][1000 genomes]
rs3924664	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4243262	0.86[EUR][1000 genomes]
rs4243264	0.85[EUR][1000 genomes]
rs4300738	0.85[ASN][1000 genomes]
rs4303629	0.86[ASN][1000 genomes]
rs4474776	0.84[ASN][1000 genomes]
rs4514768	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4629063	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4633808	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs57032575	0.85[ASN][1000 genomes]
rs7228101	0.86[EUR][1000 genomes]
rs7229728	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7230640	0.85[EUR][1000 genomes]
rs7231626	0.85[EUR][1000 genomes]
rs7232069	0.85[EUR][1000 genomes]
rs7238529	0.85[EUR][1000 genomes]
rs7239787	0.86[ASN][1000 genomes]
rs7506104	0.84[ASN][1000 genomes]
rs8086796	0.85[ASN][1000 genomes]
rs8096568	0.81[ASN][1000 genomes]
rs9951191	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9959682	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9964460	0.85[EUR][1000 genomes]
rs9964813	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9967058	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40164200-40167400	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr18:40164200-40167800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr18:40164800-40167600	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr18:40165000-40166600	Enhancers	H1 Cell Line	embryonic stem cell
5	chr18:40165600-40166600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr18:40166000-40167400	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr18:40166000-40167600	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr18:40166200-40167200	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr18:40166200-40167600	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr18:40166400-40166800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr18:40166400-40167000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr18:40166400-40167400	Enhancers	H9 Cell Line	embryonic stem cell
13	chr18:40166400-40167400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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