Variant report

Variant	rs4515870
Chromosome Location	chr10:21751611-21751612
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11595231	1.00[ASN][1000 genomes]
rs1243180	1.00[YRI][hapmap]
rs12762379	1.00[ASN][1000 genomes]
rs12770228	1.00[CHD][hapmap]
rs12779845	1.00[ASN][1000 genomes]
rs16921724	1.00[ASN][1000 genomes]
rs35841043	1.00[ASN][1000 genomes]
rs3940961	1.00[ASN][1000 genomes]
rs56320526	1.00[ASN][1000 genomes]
rs58335572	1.00[ASN][1000 genomes]
rs6482173	1.00[ASN][1000 genomes]
rs7074362	1.00[ASN][1000 genomes]
rs72793061	1.00[ASN][1000 genomes]
rs72794850	1.00[ASN][1000 genomes]
rs72794858	1.00[ASN][1000 genomes]
rs72794863	1.00[ASN][1000 genomes]
rs72802914	1.00[ASN][1000 genomes]
rs72802923	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825284	chr10:21739527-21847437	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
2	nsv825285	chr10:21742026-21874334	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21738600-21762000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:21748000-21751800	Weak transcription	Fetal Muscle Leg	muscle
3	chr10:21751400-21753400	Enhancers	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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