Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21623994..21626043-chr10:21635914..21638277,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11012606	1.00[ASN][1000 genomes]
rs11012680	0.80[EUR][1000 genomes]
rs11594245	0.88[EUR][1000 genomes]
rs11595231	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11597239	0.94[EUR][1000 genomes]
rs11597707	0.94[EUR][1000 genomes]
rs12413399	0.94[EUR][1000 genomes]
rs12762379	1.00[ASN][1000 genomes]
rs12770644	1.00[ASN][1000 genomes]
rs12779845	1.00[ASN][1000 genomes]
rs16921724	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2039029	0.88[EUR][1000 genomes]
rs34297119	0.94[EUR][1000 genomes]
rs35841043	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3940961	1.00[ASN][1000 genomes]
rs4515870	1.00[ASN][1000 genomes]
rs55773472	0.91[EUR][1000 genomes]
rs55953944	0.94[EUR][1000 genomes]
rs58335572	1.00[ASN][1000 genomes]
rs6415965	0.88[EUR][1000 genomes]
rs6482173	1.00[ASN][1000 genomes]
rs7071130	0.88[EUR][1000 genomes]
rs7074362	1.00[ASN][1000 genomes]
rs7079617	0.88[EUR][1000 genomes]
rs7080007	0.88[EUR][1000 genomes]
rs7089695	0.94[EUR][1000 genomes]
rs7098870	0.88[EUR][1000 genomes]
rs72793067	0.94[EUR][1000 genomes]
rs72793075	0.94[EUR][1000 genomes]
rs72793077	0.85[EUR][1000 genomes]
rs72793079	0.94[EUR][1000 genomes]
rs72793086	0.81[EUR][1000 genomes]
rs72794850	1.00[ASN][1000 genomes]
rs72798577	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7893639	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv831807	chr10:21509185-21688043	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21626000-21638800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:21626000-21638800	Weak transcription	Aorta	Aorta
3	chr10:21626400-21638800	Weak transcription	Right Atrium	heart
4	chr10:21626400-21639200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr10:21627000-21639000	Weak transcription	NHEK	skin
6	chr10:21627800-21638000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr10:21634600-21638600	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr10:21634600-21638800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:21634800-21638800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr10:21635000-21638800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr10:21635400-21638800	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr10:21636600-21638800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr10:21637000-21638000	Weak transcription	Fetal Lung	lung
14	chr10:21637400-21639600	Enhancers	Fetal Muscle Leg	muscle
15	chr10:21637600-21637800	Genic enhancers	A549	lung

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