The 2.0 version of rSNPBase

Variant report

Variant rs45624631
Chromosome Location chr10:89475576-89475577
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89457600-89475800 Weak transcription Right Ventricle heart
2 chr10:89460400-89512000 Weak transcription HSMM muscle
3 chr10:89462200-89494800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr10:89462400-89482600 Weak transcription Small Intestine intestine
5 chr10:89462400-89482800 Weak transcription Colonic Mucosa Colon
6 chr10:89462800-89476800 Weak transcription Fetal Muscle Trunk muscle
7 chr10:89463000-89489400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr10:89463000-89494600 Weak transcription Fetal Muscle Leg muscle
9 chr10:89463000-89541400 Weak transcription Rectal Smooth Muscle rectum
10 chr10:89466200-89494600 Weak transcription A549 lung
11 chr10:89466800-89494600 Weak transcription Hela-S3 cervix
12 chr10:89467800-89475600 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr10:89467800-89480200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr10:89468200-89482800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr10:89468600-89475800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr10:89468600-89494000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr10:89468800-89483200 Strong transcription Osteobl bone
18 chr10:89469200-89477200 Strong transcription NHLF lung
19 chr10:89469200-89481800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr10:89469600-89477200 Strong transcription Sigmoid Colon Sigmoid Colon
21 chr10:89469600-89479000 Strong transcription Rectal Mucosa Donor 29 rectum
22 chr10:89469800-89477800 Strong transcription Fetal Intestine Large intestine
23 chr10:89469800-89479600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:89470200-89480000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr10:89470200-89487000 Weak transcription Aorta Aorta
26 chr10:89470600-89493800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr10:89471000-89476400 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr10:89471400-89476200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr10:89472400-89503000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr10:89472800-89477000 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr10:89473000-89476200 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr10:89473000-89477000 Strong transcription HUES48 Cell Line embryonic stem cell
33 chr10:89473000-89477200 Genic enhancers HUVEC blood vessel
34 chr10:89473000-89477200 Strong transcription NH-A brain
35 chr10:89473000-89482400 Weak transcription Fetal Kidney kidney
36 chr10:89473000-89577200 Weak transcription Gastric stomach
37 chr10:89473200-89476000 Strong transcription Muscle Satellite Cultured Cells --
38 chr10:89473600-89475800 Weak transcription H1 Cell Line embryonic stem cell
39 chr10:89473600-89494000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr10:89473800-89493600 Weak transcription H9 Cell Line embryonic stem cell
41 chr10:89474000-89476200 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr10:89474200-89476000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr10:89474400-89476000 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr10:89474400-89476000 Strong transcription NHDF-Ad bronchial
45 chr10:89474400-89476200 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr10:89474600-89475800 Weak transcription Primary hematopoietic stem cells blood
47 chr10:89474800-89477200 Strong transcription Fetal Lung lung
48 chr10:89475000-89476000 Enhancers Brain Anterior Caudate brain
49 chr10:89475000-89476800 Genic enhancers Adipose Nuclei Adipose
50 chr10:89475000-89478400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015