Variant report

Variant	rs4571678
Chromosome Location	chr7:117050469-117050470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:117050387-117057168..7:117100350-117112126	H1-hESC	embryonic stem cell:	embryo
2	chr7:117046103..117047877-chr7:117049438..117051595,2	K562	blood:

Variant related genes	Relation type
ENSG00000001626	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1029397	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10487372	1.00[JPT][hapmap]
rs11978434	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17139830	1.00[CEU][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17139859	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs17139881	1.00[CEU][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17139920	0.87[YRI][hapmap]
rs17347210	0.81[YRI][hapmap]
rs2228946	1.00[JPT][hapmap]
rs254536	0.87[YRI][hapmap]
rs34180375	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34442917	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34624661	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34652497	1.00[ASN][1000 genomes]
rs34849722	1.00[ASN][1000 genomes]
rs34979995	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35071293	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35091062	0.93[EUR][1000 genomes]
rs35604119	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35783977	1.00[ASN][1000 genomes]
rs35915869	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36046385	1.00[ASN][1000 genomes]
rs36143281	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs39317	0.89[YRI][hapmap]
rs39324	0.87[YRI][hapmap]
rs55728161	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55901305	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58707615	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61711770	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6972819	1.00[JPT][hapmap];0.86[YRI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73714649	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73714651	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs989727	1.00[CEU][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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