Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10168461	0.88[ASN][1000 genomes]
rs10201844	0.88[EUR][1000 genomes]
rs11125985	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12612549	0.85[EUR][1000 genomes]
rs12612596	0.90[EUR][1000 genomes]
rs12613707	0.90[EUR][1000 genomes]
rs13384707	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs169035	0.81[ASN][1000 genomes]
rs2054119	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2168274	0.88[ASN][1000 genomes]
rs2592389	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs262498	0.81[ASN][1000 genomes]
rs262499	0.81[ASN][1000 genomes]
rs262500	0.81[ASN][1000 genomes]
rs36042418	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4072113	0.88[EUR][1000 genomes]
rs4359637	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4399712	0.88[EUR][1000 genomes]
rs4671532	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6546025	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6546026	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6546027	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6737855	0.88[EUR][1000 genomes]
rs9309356	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs998043	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834242	chr2:63891249-64045617	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63896400-63911400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:63908800-63923400	Weak transcription	Adipose Nuclei	Adipose
3	chr2:63909200-63911400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr2:63909200-63925600	Weak transcription	Psoas Muscle	Psoas

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