Variant report

Variant	rs4678445
Chromosome Location	chr3:136539024-136539025
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:136468701..136475672-chr3:136535815..136540749,9	K562	blood:
2	chr3:136537560..136539935-chr3:136579290..136582081,4	K562	blood:
3	chr3:136536665..136539935-chr3:136579370..136582081,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TMEM22-2	chr3:136537489-136539354	NONHSAT092287

Variant related genes	Relation type
ENSG00000261758	Chromatin interaction
ENSG00000239213	Chromatin interaction
ENSG00000118007	Chromatin interaction
ENSG00000158092	Chromatin interaction

Extended variants
information (count: 204 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:201)

rs_ID	r²[population]
rs10470440	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1052618	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10935198	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10935210	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11921170	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11924477	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12330283	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12487901	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12488365	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12491278	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12491729	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12491730	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12497379	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12630955	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12633003	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12633073	0.90[EUR][1000 genomes]
rs12637949	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12695653	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12695654	0.87[EUR][1000 genomes]
rs13315318	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1344790	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1347209	0.92[ASN][1000 genomes]
rs1400261	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1406540	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1406541	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1433318	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1433319	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1533445	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1569228	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1569229	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1805300	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1819095	0.92[ASN][1000 genomes]
rs1865149	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1914048	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1965108	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1965109	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1971788	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2031029	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2031030	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2060303	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2117009	0.92[ASN][1000 genomes]
rs2117010	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2138540	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2138541	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2271684	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2343662	0.90[EUR][1000 genomes]
rs2343663	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28458819	0.90[ASN][1000 genomes]
rs28564581	0.92[EUR][1000 genomes]
rs28671336	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28672119	0.82[AFR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28761333	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2880767	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28877307	0.84[ASN][1000 genomes]
rs35339486	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35760633	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3772387	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3772388	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3845925	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3856623	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3915455	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3963921	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4038076	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4038077	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4420814	0.88[ASN][1000 genomes]
rs4533585	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4594566	0.86[EUR][1000 genomes]
rs4600775	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4678272	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4678273	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4678274	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4678276	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4678441	0.96[ASN][1000 genomes]
rs4678442	0.96[ASN][1000 genomes]
rs4678443	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4678444	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4678448	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4678450	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4678451	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4678452	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56163507	0.87[ASN][1000 genomes]
rs56695781	0.83[ASN][1000 genomes]
rs60574021	0.90[ASN][1000 genomes]
rs6439663	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6439664	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6439667	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6439670	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6439671	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6439672	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6439673	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6439675	0.92[ASN][1000 genomes]
rs6761993	0.92[ASN][1000 genomes]
rs6766755	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6771717	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6773117	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6775389	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6777816	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6777873	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6782716	0.88[EUR][1000 genomes]
rs6783508	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6783999	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6784005	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6786302	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6786648	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6793936	0.88[ASN][1000 genomes]
rs6793966	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6797509	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6800032	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6800690	0.92[ASN][1000 genomes]
rs6802291	0.89[ASN][1000 genomes]
rs6803618	0.92[ASN][1000 genomes]
rs6809943	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7431100	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7434143	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7611847	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7614422	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7617932	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7621932	0.89[ASN][1000 genomes]
rs7627443	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7629659	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7629882	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7630571	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7631017	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7633629	0.89[ASN][1000 genomes]
rs7636956	0.89[EUR][1000 genomes]
rs7639692	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7645773	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7647451	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7648817	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7649211	0.82[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs7651085	0.92[ASN][1000 genomes]
rs7651644	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs856662	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9289518	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9289519	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9289520	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9289523	0.92[ASN][1000 genomes]
rs938524	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs938525	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9682106	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9757179	0.81[ASN][1000 genomes]
rs9811169	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9815771	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9817118	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9817132	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9817453	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9817967	0.92[ASN][1000 genomes]
rs9818397	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9818792	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9819572	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9819743	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9819804	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs9821557	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9823565	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9827648	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9828009	0.92[ASN][1000 genomes]
rs9832045	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9833952	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9834250	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9834438	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9834861	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9835096	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9836807	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9837990	0.92[ASN][1000 genomes]
rs9838022	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9841985	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9842145	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9842400	0.87[EUR][1000 genomes]
rs9842436	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9842577	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9843352	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9843733	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9846334	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9846691	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9846754	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9847548	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9848867	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9849767	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9851726	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9853417	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9855314	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9856828	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9859665	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9859810	0.92[ASN][1000 genomes]
rs9860774	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9863551	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9864926	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9864941	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9865545	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9870377	0.90[ASN][1000 genomes]
rs9871987	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9874887	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9878031	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9878117	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9878367	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9878464	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9880708	0.93[AFR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9881139	0.92[ASN][1000 genomes]
rs9883108	0.88[EUR][1000 genomes]
rs9883131	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9883979	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877530	chr3:136514310-136604697	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	n/a
2	nsv877531	chr3:136517016-136662954	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	nsv877532	chr3:136526939-136662603	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:136536800-136539600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr3:136536800-136539600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
3	chr3:136537000-136539400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
4	chr3:136537000-136539600	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr3:136537000-136539600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
6	chr3:136537200-136539200	Active TSS	H9 Cell Line	embryonic stem cell
7	chr3:136537200-136539200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
8	chr3:136537200-136539200	Active TSS	Brain Anterior Caudate	brain
9	chr3:136537200-136539200	Active TSS	NHDF-Ad	bronchial
10	chr3:136537200-136539400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
11	chr3:136537200-136539400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
12	chr3:136537200-136539400	Active TSS	Brain Substantia Nigra	brain
13	chr3:136537200-136539400	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr3:136537200-136539400	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
15	chr3:136537200-136539600	Active TSS	Brain Angular Gyrus	brain
16	chr3:136537200-136539600	Active TSS	Brain Hippocampus Middle	brain
17	chr3:136537200-136539600	Active TSS	Brain Inferior Temporal Lobe	brain
18	chr3:136537400-136539200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr3:136537400-136539200	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
20	chr3:136537400-136539200	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
21	chr3:136537400-136539200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr3:136537400-136539200	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
23	chr3:136537400-136539200	Active TSS	HSMMtube	muscle
24	chr3:136537400-136539200	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
25	chr3:136537400-136539400	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr3:136537400-136539400	Active TSS	Fetal Kidney	kidney
27	chr3:136537400-136539400	Flanking Active TSS	HMEC	breast
28	chr3:136537400-136539600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr3:136537400-136539600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
30	chr3:136537400-136539800	Active TSS	A549	lung
31	chr3:136537600-136539200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
32	chr3:136537600-136539200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr3:136537600-136539200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr3:136537600-136539200	Active TSS	NH-A	brain
35	chr3:136537600-136539200	Active TSS	Osteobl	bone
36	chr3:136537600-136539400	Active TSS	Brain Germinal Matrix	brain
37	chr3:136537800-136539200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr3:136537800-136539200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr3:136537800-136539200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
40	chr3:136537800-136539200	Bivalent/Poised TSS	Primary mononuclear cells fromperipheralblood	Blood
41	chr3:136537800-136539200	Active TSS	Colon Smooth Muscle	Colon
42	chr3:136537800-136539200	Active TSS	Rectal Smooth Muscle	rectum
43	chr3:136537800-136539200	Active TSS	Sigmoid Colon	Sigmoid Colon
44	chr3:136537800-136539600	Active TSS	Brain Cingulate Gyrus	brain
45	chr3:136538000-136539200	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
46	chr3:136538000-136539200	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
47	chr3:136538000-136539200	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
48	chr3:136538000-136539400	Flanking Active TSS	Right Ventricle	heart
49	chr3:136538000-136539600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr3:136538200-136539200	Flanking Active TSS	Primary hematopoietic stem cells	blood

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