The 2.0 version of rSNPBase

Variant report

Variant rs6800690
Chromosome Location chr3:136623026-136623027
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136609400-136625200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:136613200-136648800 Weak transcription Muscle Satellite Cultured Cells --
3 chr3:136613400-136625400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:136613400-136626200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr3:136613600-136625200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr3:136613600-136625200 Weak transcription Ovary ovary
7 chr3:136613600-136625200 Weak transcription Pancreas Pancrea
8 chr3:136613600-136626200 Weak transcription HMEC breast
9 chr3:136613600-136633600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr3:136613600-136638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:136614000-136625200 Weak transcription Gastric stomach
12 chr3:136614000-136625200 Weak transcription Spleen Spleen
13 chr3:136618200-136625200 Weak transcription Left Ventricle heart
14 chr3:136618200-136625200 Weak transcription Right Atrium heart
15 chr3:136618600-136624800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr3:136618600-136627200 Weak transcription Small Intestine intestine
17 chr3:136618800-136624200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr3:136619200-136625200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr3:136619200-136656800 Weak transcription NHLF lung
20 chr3:136619400-136624600 Weak transcription Psoas Muscle Psoas
21 chr3:136620800-136625600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:136621000-136628000 Weak transcription Hela-S3 cervix
23 chr3:136621600-136625600 Weak transcription K562 blood
24 chr3:136621600-136625800 Weak transcription HUVEC blood vessel
25 chr3:136621800-136625400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr3:136622000-136623200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:136622000-136623800 ZNF genes & repeats Dnd41 blood
28 chr3:136622000-136625200 Weak transcription H1 Cell Line embryonic stem cell
29 chr3:136622000-136625400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr3:136622200-136624600 Weak transcription Primary T cells from cord blood blood
31 chr3:136622200-136625400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr3:136622200-136628000 Weak transcription Liver Liver
33 chr3:136622200-136633000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr3:136622400-136624200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
35 chr3:136622400-136624800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr3:136622400-136626600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
37 chr3:136622600-136623600 ZNF genes & repeats Colon Smooth Muscle Colon
38 chr3:136622600-136624200 ZNF genes & repeats Primary B cells from peripheral blood blood
39 chr3:136622600-136624200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
40 chr3:136622800-136624200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
41 chr3:136623000-136623600 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr3:136623000-136623600 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
43 chr3:136623000-136623800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
44 chr3:136623000-136626200 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015