The 2.0 version of rSNPBase

Variant report

Variant rs6439675
Chromosome Location chr3:136625436-136625437
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136613200-136648800 Weak transcription Muscle Satellite Cultured Cells --
2 chr3:136613400-136626200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:136613600-136626200 Weak transcription HMEC breast
4 chr3:136613600-136633600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr3:136613600-136638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr3:136618600-136627200 Weak transcription Small Intestine intestine
7 chr3:136619200-136656800 Weak transcription NHLF lung
8 chr3:136620800-136625600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:136621000-136628000 Weak transcription Hela-S3 cervix
10 chr3:136621600-136625600 Weak transcription K562 blood
11 chr3:136621600-136625800 Weak transcription HUVEC blood vessel
12 chr3:136622200-136628000 Weak transcription Liver Liver
13 chr3:136622200-136633000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr3:136622400-136626600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:136623000-136626200 Weak transcription Fetal Kidney kidney
16 chr3:136623200-136631600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:136623800-136626200 ZNF genes & repeats Fetal Muscle Leg muscle
18 chr3:136623800-136628000 Weak transcription Brain Substantia Nigra brain
19 chr3:136624000-136625800 Enhancers Thymus Thymus
20 chr3:136624000-136626400 ZNF genes & repeats Fetal Intestine Small intestine
21 chr3:136624000-136628600 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr3:136624000-136630200 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr3:136624200-136625800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr3:136624200-136626600 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr3:136624200-136626800 Enhancers Primary T cells fromperipheralblood blood
26 chr3:136624200-136630800 Enhancers Primary T helper cells PMA-I stimulated --
27 chr3:136624200-136664400 Weak transcription Aorta Aorta
28 chr3:136624400-136626600 Enhancers Sigmoid Colon Sigmoid Colon
29 chr3:136624400-136630000 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr3:136624400-136630400 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr3:136624600-136626200 Enhancers Dnd41 blood
32 chr3:136624600-136626600 Genic enhancers Fetal Thymus thymus
33 chr3:136624600-136626600 Enhancers Psoas Muscle Psoas
34 chr3:136624600-136629200 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr3:136624600-136632000 Enhancers Primary T helper cells fromperipheralblood blood
36 chr3:136624600-136637600 Weak transcription Primary hematopoietic stem cells blood
37 chr3:136624600-136639800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr3:136624800-136626000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr3:136624800-136626400 Enhancers Skeletal Muscle Male skeletal muscle
40 chr3:136624800-136626600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:136624800-136626800 ZNF genes & repeats Fetal Intestine Large intestine
42 chr3:136624800-136630000 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr3:136624800-136632000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr3:136625000-136626000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr3:136625000-136626200 Enhancers Primary B cells from peripheral blood blood
46 chr3:136625000-136626600 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr3:136625000-136628600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:136625200-136625600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr3:136625200-136625600 Enhancers Fetal Muscle Trunk muscle
50 chr3:136625200-136625600 Enhancers Right Ventricle heart

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Last update: Aug 31, 2015