The 2.0 version of rSNPBase

Variant report

Variant rs1819095
Chromosome Location chr3:136624044-136624045
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136609400-136625200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:136613200-136648800 Weak transcription Muscle Satellite Cultured Cells --
3 chr3:136613400-136625400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:136613400-136626200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr3:136613600-136625200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr3:136613600-136625200 Weak transcription Ovary ovary
7 chr3:136613600-136625200 Weak transcription Pancreas Pancrea
8 chr3:136613600-136626200 Weak transcription HMEC breast
9 chr3:136613600-136633600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr3:136613600-136638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:136614000-136625200 Weak transcription Gastric stomach
12 chr3:136614000-136625200 Weak transcription Spleen Spleen
13 chr3:136618200-136625200 Weak transcription Left Ventricle heart
14 chr3:136618200-136625200 Weak transcription Right Atrium heart
15 chr3:136618600-136624800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr3:136618600-136627200 Weak transcription Small Intestine intestine
17 chr3:136618800-136624200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr3:136619200-136625200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr3:136619200-136656800 Weak transcription NHLF lung
20 chr3:136619400-136624600 Weak transcription Psoas Muscle Psoas
21 chr3:136620800-136625600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:136621000-136628000 Weak transcription Hela-S3 cervix
23 chr3:136621600-136625600 Weak transcription K562 blood
24 chr3:136621600-136625800 Weak transcription HUVEC blood vessel
25 chr3:136621800-136625400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr3:136622000-136625200 Weak transcription H1 Cell Line embryonic stem cell
27 chr3:136622000-136625400 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr3:136622200-136624600 Weak transcription Primary T cells from cord blood blood
29 chr3:136622200-136625400 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr3:136622200-136628000 Weak transcription Liver Liver
31 chr3:136622200-136633000 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr3:136622400-136624200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:136622400-136624800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr3:136622400-136626600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
35 chr3:136622600-136624200 ZNF genes & repeats Primary B cells from peripheral blood blood
36 chr3:136622600-136624200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
37 chr3:136622800-136624200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
38 chr3:136623000-136626200 Weak transcription Fetal Kidney kidney
39 chr3:136623200-136631600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:136623600-136624200 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr3:136623600-136624800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr3:136623600-136625400 Weak transcription Colon Smooth Muscle Colon
43 chr3:136623800-136624200 ZNF genes & repeats Primary T cells fromperipheralblood blood
44 chr3:136623800-136624200 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
45 chr3:136623800-136625000 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr3:136623800-136626200 ZNF genes & repeats Fetal Muscle Leg muscle
47 chr3:136623800-136628000 Weak transcription Brain Substantia Nigra brain
48 chr3:136624000-136624200 ZNF genes & repeats Aorta Aorta
49 chr3:136624000-136625800 Enhancers Thymus Thymus
50 chr3:136624000-136626400 ZNF genes & repeats Fetal Intestine Small intestine

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Last update: Aug 31, 2015