Variant report

Variant	rs4691184
Chromosome Location	chr4:166271778-166271779
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11100606	0.83[ASN][1000 genomes]
rs11732637	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12498302	0.84[ASN][1000 genomes]
rs12509710	0.83[ASN][1000 genomes]
rs12512757	0.87[ASN][1000 genomes]
rs12513198	0.81[JPT][hapmap]
rs12641145	0.86[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs13113058	0.84[ASN][1000 genomes]
rs13113441	0.89[ASN][1000 genomes]
rs1438116	0.90[EUR][1000 genomes]
rs1550271	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1866218	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1866219	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2322292	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35801858	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3775318	0.90[EUR][1000 genomes]
rs4690810	0.82[JPT][hapmap];0.81[YRI][hapmap];0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4691183	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs59447340	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6827255	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6827346	0.95[CHB][hapmap];0.91[JPT][hapmap];0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6828152	0.81[JPT][hapmap];0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs756090	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7655392	0.82[JPT][hapmap];0.81[YRI][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7667236	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7690328	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847399	chr4:166259587-166284836	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases
2	esv2763404	chr4:166265940-166275340	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166253400-166272600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:166261400-166272600	Weak transcription	HSMMtube	muscle
3	chr4:166261600-166272800	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr4:166263200-166280400	Weak transcription	Adipose Nuclei	Adipose
5	chr4:166263400-166272800	Weak transcription	NH-A	brain
6	chr4:166264000-166274600	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr4:166264200-166274800	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr4:166265200-166272400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr4:166267000-166272800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:166269800-166272200	Weak transcription	HepG2	liver
11	chr4:166270000-166276800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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