Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:27238414-27242313..7:27439194-27449722	K562	blood:

Variant related genes	Relation type
ENSG00000243766	Chromatin interaction
ENSG00000106031	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10242634	0.85[EUR][1000 genomes]
rs10252511	0.84[EUR][1000 genomes]
rs10252636	0.84[EUR][1000 genomes]
rs10269160	0.84[EUR][1000 genomes]
rs10272441	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10272561	0.91[EUR][1000 genomes]
rs10272948	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10276795	0.84[EUR][1000 genomes]
rs1112620	0.84[EUR][1000 genomes]
rs11762257	1.00[ASN][1000 genomes]
rs1476538	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2074340	0.84[EUR][1000 genomes]
rs28418930	0.85[EUR][1000 genomes]
rs28668661	1.00[ASN][1000 genomes]
rs3915089	0.84[EUR][1000 genomes]
rs4141138	0.85[EUR][1000 genomes]
rs4722698	0.93[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4722700	0.88[EUR][1000 genomes]
rs4722706	0.84[EUR][1000 genomes]
rs4722707	0.84[EUR][1000 genomes]
rs62454765	0.90[EUR][1000 genomes]
rs62454789	0.85[EUR][1000 genomes]
rs62454790	0.85[EUR][1000 genomes]
rs62454832	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531024	chr7:27194426-27461954	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
2	nsv830930	chr7:27395838-27587355	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27444800-27458000	Weak transcription	Pancreas	Pancrea
2	chr7:27444800-27458000	Weak transcription	Stomach Mucosa	stomach
3	chr7:27447600-27449000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr7:27448400-27449200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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