Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:45354038..45357345-chr11:45359255..45361825,3	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10742748	0.87[EUR][1000 genomes]
rs10742749	0.87[EUR][1000 genomes]
rs10742750	0.99[ASN][1000 genomes]
rs10769138	0.87[EUR][1000 genomes]
rs10838446	0.87[EUR][1000 genomes]
rs11038390	0.85[EUR][1000 genomes]
rs11530155	0.85[EUR][1000 genomes]
rs34801223	0.86[EUR][1000 genomes]
rs4755962	0.81[EUR][1000 genomes]
rs4755965	0.84[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs4755966	0.81[EUR][1000 genomes]
rs4755967	0.85[EUR][1000 genomes]
rs4755969	0.82[EUR][1000 genomes]
rs4755970	0.82[EUR][1000 genomes]
rs6416133	0.81[EUR][1000 genomes]
rs6485613	0.81[EUR][1000 genomes]
rs6485616	0.81[EUR][1000 genomes]
rs6485619	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6485620	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7106802	0.82[EUR][1000 genomes]
rs7110287	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs7112192	0.82[EUR][1000 genomes]
rs7112723	0.91[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7124597	0.82[EUR][1000 genomes]
rs7478974	0.87[EUR][1000 genomes]
rs7479052	0.87[EUR][1000 genomes]
rs7480542	0.81[EUR][1000 genomes]
rs7482739	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7925771	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7946683	0.82[EUR][1000 genomes]
rs9667484	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	esv2537828	chr11:45356121-45357741	Weak transcription Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
3	esv2254869	chr11:45356298-45357379	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45353400-45357800	Enhancers	Fetal Muscle Leg	muscle
2	chr11:45353800-45357000	Weak transcription	Fetal Muscle Trunk	muscle
3	chr11:45354400-45359400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr11:45355200-45361000	Weak transcription	Fetal Kidney	kidney
5	chr11:45355600-45356600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:45355600-45359400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr11:45355600-45359600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:45355600-45361200	Weak transcription	Fetal Stomach	stomach
9	chr11:45356200-45360600	Weak transcription	Fetal Brain Male	brain
10	chr11:45356400-45361000	Weak transcription	Fetal Brain Female	brain

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