Variant report

Variant	rs4764036
Chromosome Location	chr12:13996606-13996607
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10744039	0.89[CEU][hapmap];0.81[CHD][hapmap];0.84[MEX][hapmap]
rs10845847	0.83[GIH][hapmap];0.88[MEX][hapmap]
rs1120905	0.95[CHB][hapmap];0.84[CHD][hapmap];0.87[GIH][hapmap];0.91[JPT][hapmap];0.83[MEX][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1861786	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];0.92[GIH][hapmap];0.95[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2193509	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2193512	0.82[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.95[GIH][hapmap];0.91[JPT][hapmap];0.80[MEX][hapmap];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs220557	0.80[GIH][hapmap]
rs220568	0.80[GIH][hapmap];0.91[MEX][hapmap]
rs220573	0.83[GIH][hapmap];0.91[MEX][hapmap]
rs220575	0.81[ASW][hapmap];0.83[GIH][hapmap];0.91[MEX][hapmap]
rs220578	0.80[GIH][hapmap];0.91[MEX][hapmap]
rs220585	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs220587	0.92[CEU][hapmap];1.00[GIH][hapmap];0.80[JPT][hapmap];0.96[MEX][hapmap];0.98[TSI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs220599	0.93[GIH][hapmap];0.96[MEX][hapmap];0.85[YRI][hapmap]
rs2284426	0.95[CHB][hapmap];0.91[JPT][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2300267	0.89[CEU][hapmap];0.81[CHD][hapmap];0.83[MEX][hapmap]
rs2300273	0.85[YRI][hapmap]
rs2417306	0.82[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.85[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4140765	0.85[CEU][hapmap];0.81[CHD][hapmap];0.84[MEX][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:13989000-13996800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr12:13990800-14002200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr12:13992600-14002400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr12:13992800-13997200	Weak transcription	Fetal Brain Female	brain
5	chr12:13993400-14002800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr12:13995600-13999200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr12:13996600-13997200	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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