Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10185849	0.91[CHB][hapmap]
rs10188201	0.91[CHB][hapmap];0.87[JPT][hapmap]
rs10496637	0.91[CHB][hapmap]
rs11123050	0.81[CHB][hapmap]
rs11682973	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs11888767	0.82[CHB][hapmap]
rs11896097	0.82[CHB][hapmap]
rs11899391	0.80[CHB][hapmap]
rs12464032	0.82[CHB][hapmap]
rs12464048	0.82[CHB][hapmap]
rs12468237	0.82[CHB][hapmap]
rs12470517	0.82[CHB][hapmap]
rs12623983	0.91[CHB][hapmap]
rs12711680	0.84[CEU][hapmap];0.90[CHB][hapmap]
rs12995531	0.80[CHB][hapmap]
rs13030176	0.82[CHB][hapmap]
rs1504006	0.82[CHB][hapmap]
rs1504008	0.82[CHB][hapmap]
rs1504009	0.82[CHB][hapmap]
rs17011693	0.91[CHB][hapmap];0.81[JPT][hapmap];0.80[ASN][1000 genomes]
rs17011723	0.82[CHB][hapmap]
rs17011727	0.83[CHB][hapmap]
rs17011734	0.82[CHB][hapmap]
rs1857690	0.81[CHB][hapmap]
rs1857691	0.82[CHB][hapmap]
rs1857694	0.82[CHB][hapmap]
rs1910527	0.91[CHB][hapmap]
rs2047875	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs2047876	0.91[CHB][hapmap]
rs2047877	0.91[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs4402762	0.81[CHB][hapmap]
rs6541959	0.91[CHB][hapmap];0.87[JPT][hapmap]
rs6707944	0.91[CHB][hapmap];0.87[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014610	chr2:125124983-125350342	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv834357	chr2:125258157-125421507	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3437542	chr2:125314184-125315932	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125315800-125316600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr2:125315800-125317000	Enhancers	Fetal Brain Male	brain

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