Variant report
| Variant | rs485857 |
|---|---|
| Chromosome Location | chr11:65959519-65959520 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:65906000-65960200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 2 | chr11:65929400-65960200 | Weak transcription | HSMM | muscle |
| 3 | chr11:65929600-65977800 | Weak transcription | HSMMtube | muscle |
| 4 | chr11:65930000-65960200 | Weak transcription | Colon Smooth Muscle | Colon |
| 5 | chr11:65930000-65960800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr11:65938400-65978000 | Weak transcription | Aorta | Aorta |
| 7 | chr11:65938600-65960800 | Weak transcription | Dnd41 | blood |
| 8 | chr11:65939400-65960200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 9 | chr11:65940000-65978000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 10 | chr11:65940200-65960400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 11 | chr11:65940200-65960400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 12 | chr11:65940400-65978000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr11:65943200-65959600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr11:65944400-65977800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr11:65944600-65963600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 16 | chr11:65947800-65961000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 17 | chr11:65949800-65960400 | Weak transcription | Liver | Liver |
| 18 | chr11:65949800-65977800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 19 | chr11:65950000-65959800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr11:65950200-65978400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 21 | chr11:65950600-65960400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 22 | chr11:65950800-65960200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr11:65951200-65959800 | Weak transcription | Right Ventricle | heart |
| 24 | chr11:65951200-65960800 | Weak transcription | Fetal Muscle Leg | muscle |
| 25 | chr11:65951200-65960800 | Weak transcription | Ovary | ovary |
| 26 | chr11:65951200-65962800 | Weak transcription | Brain Substantia Nigra | brain |
| 27 | chr11:65951400-65959600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 28 | chr11:65951400-65960000 | Weak transcription | Spleen | Spleen |
| 29 | chr11:65951400-65960200 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr11:65951400-65960800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 31 | chr11:65951400-65960800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 32 | chr11:65951600-65959800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 33 | chr11:65951600-65960400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 34 | chr11:65951600-65960400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 35 | chr11:65951600-65960600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 36 | chr11:65951600-65960800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 37 | chr11:65951600-65961000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 38 | chr11:65951800-65960600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 39 | chr11:65952200-65961800 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr11:65952200-65967400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr11:65952400-65960600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 42 | chr11:65952400-65967800 | Weak transcription | Brain Germinal Matrix | brain |
| 43 | chr11:65953000-65966200 | Strong transcription | Primary T cells from cord blood | blood |
| 44 | chr11:65954000-65960000 | Weak transcription | Fetal Stomach | stomach |
| 45 | chr11:65954000-65960400 | Weak transcription | Thymus | Thymus |
| 46 | chr11:65954400-65961000 | Weak transcription | Fetal Thymus | thymus |
| 47 | chr11:65955200-65960800 | Weak transcription | Fetal Brain Female | brain |
| 48 | chr11:65956400-65960000 | Enhancers | Stomach Mucosa | stomach |
| 49 | chr11:65956400-65967400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr11:65956800-65961000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
