Variant report

Variant	rs10791855
Chromosome Location	chr11:65963737-65963738
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:65900786..65903675-chr11:65962216..65963909,2	MCF-7	breast:
2	chr11:65956435..65961151-chr11:65961394..65965581,4	K562	blood:

Extended variants
information (count: 133 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs1055615	1.00[CEU][hapmap]
rs10750777	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10750778	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10750780	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10750781	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10791838	1.00[CEU][hapmap]
rs10791840	1.00[CEU][hapmap];0.82[GIH][hapmap]
rs10791845	0.86[GIH][hapmap]
rs10791849	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10791850	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10791851	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10791852	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10791853	0.97[EUR][1000 genomes]
rs10791854	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10791856	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10791858	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10791859	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10791860	0.93[AFR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10791861	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10791862	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10791863	0.84[ASW][hapmap];0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.93[YRI][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10896075	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs10896076	0.83[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10896077	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10896080	0.91[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10896081	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10896085	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10896087	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10896089	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896090	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896091	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896092	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10896093	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896094	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10896095	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10896097	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10896098	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10896099	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10896100	0.90[AFR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10896105	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11227403	0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11227409	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11227410	1.00[CEU][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11227411	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11227413	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11227414	0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11227415	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11227420	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11227426	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11227433	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11227439	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11227447	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.95[ASN][1000 genomes]
rs11227448	0.84[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.93[YRI][hapmap];0.95[ASN][1000 genomes]
rs11227452	0.89[ASN][1000 genomes]
rs11607393	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12049852	0.95[EUR][1000 genomes]
rs12226649	0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12576969	1.00[CEU][hapmap];0.83[CHB][hapmap];0.82[GIH][hapmap]
rs12797158	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12797586	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12800670	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1717671	0.92[EUR][1000 genomes]
rs1862005	0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1987678	0.95[EUR][1000 genomes]
rs2017969	0.94[ASN][1000 genomes]
rs2155030	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.81[TSI][hapmap];0.93[YRI][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2155031	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2155198	0.80[CEU][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2155201	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2177053	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2177054	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2236651	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2236652	1.00[ASW][hapmap];0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2270448	0.90[GIH][hapmap]
rs2276036	0.86[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.93[JPT][hapmap];0.87[LWK][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2282568	0.94[CHB][hapmap];0.93[JPT][hapmap];0.93[YRI][hapmap];0.93[ASN][1000 genomes]
rs2293121	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2298466	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2298468	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.81[TSI][hapmap];0.93[YRI][hapmap];0.95[ASN][1000 genomes]
rs2430979	1.00[CEU][hapmap];0.82[GIH][hapmap]
rs2452681	0.83[GIH][hapmap]
rs2452682	1.00[CEU][hapmap];0.82[GIH][hapmap]
rs2889313	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3088328	0.94[EUR][1000 genomes]
rs3132851	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs3814738	0.84[ASW][hapmap];0.81[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.93[YRI][hapmap];0.95[ASN][1000 genomes]
rs3814744	1.00[CEU][hapmap]
rs3825067	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3862386	0.93[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3953856	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4013917	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4393319	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4483592	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4604890	0.86[AFR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs471484	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs476551	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs485857	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs488320	0.93[EUR][1000 genomes]
rs512421	0.94[CHB][hapmap];0.92[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs535395	1.00[CEU][hapmap];0.93[GIH][hapmap];0.94[TSI][hapmap];0.95[EUR][1000 genomes]
rs560393	0.93[ASN][1000 genomes]
rs571434	0.93[EUR][1000 genomes]
rs580891	0.96[EUR][1000 genomes]
rs6591203	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs6591207	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6591208	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7115081	0.86[AFR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7120326	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.89[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7124165	1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7127808	0.85[EUR][1000 genomes]
rs730787	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs7925123	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7926402	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7929909	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7931477	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7931544	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7935336	0.85[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7937281	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7941431	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7941469	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[MEX][hapmap];0.94[TSI][hapmap];0.95[EUR][1000 genomes]
rs7942894	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7943911	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7945723	0.95[ASN][1000 genomes]
rs7946447	0.88[EUR][1000 genomes]
rs7946917	0.92[ASW][hapmap];0.87[CEU][hapmap];0.89[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.88[LWK][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7951079	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs918299	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9645684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9736673	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3335923	chr11:65741698-66175759	Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
2	esv1819302	chr11:65787660-66007018	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
3	esv3407551	chr11:65794503-66158322	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
4	esv3332923	chr11:65961593-65981589	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65929600-65977800	Weak transcription	HSMMtube	muscle
2	chr11:65938400-65978000	Weak transcription	Aorta	Aorta
3	chr11:65940000-65978000	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr11:65940400-65978000	Weak transcription	Esophagus	oesophagus
5	chr11:65944400-65977800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:65949800-65977800	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr11:65950200-65978400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr11:65952200-65967400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:65952400-65967800	Weak transcription	Brain Germinal Matrix	brain
10	chr11:65953000-65966200	Strong transcription	Primary T cells from cord blood	blood
11	chr11:65956400-65967400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr11:65957000-65978400	Weak transcription	Brain Angular Gyrus	brain
13	chr11:65957400-65966000	Strong transcription	Primary B cells from peripheral blood	blood
14	chr11:65958400-65967400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:65958400-65967600	Strong transcription	Primary T helper cells PMA-I stimulated	--
16	chr11:65958800-65977800	Weak transcription	Lung	lung
17	chr11:65958800-65978600	Weak transcription	Pancreas	Pancrea
18	chr11:65958800-65983600	Weak transcription	Small Intestine	intestine
19	chr11:65958800-65989200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr11:65959000-65965800	Weak transcription	Brain Hippocampus Middle	brain
21	chr11:65959200-65967800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr11:65959200-65989400	Weak transcription	K562	blood
23	chr11:65959400-65983400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr11:65959600-65965600	Weak transcription	HUES64 Cell Line	embryonic stem cell
25	chr11:65959600-65966200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr11:65959600-65968400	Strong transcription	Primary T helper cells fromperipheralblood	blood
27	chr11:65959600-65978400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr11:65959600-65983600	Weak transcription	Colonic Mucosa	Colon
29	chr11:65959800-65964000	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr11:65959800-65966200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr11:65959800-65966200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr11:65959800-65967000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr11:65960000-65963800	Strong transcription	Fetal Stomach	stomach
34	chr11:65960000-65965400	Weak transcription	Fetal Lung	lung
35	chr11:65960000-65966200	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr11:65960200-65964000	Strong transcription	Primary monocytes fromperipheralblood	blood
37	chr11:65960200-65966000	Strong transcription	Primary B cells from cord blood	blood
38	chr11:65960200-65968000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr11:65960200-65977800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:65960200-65978000	Weak transcription	Right Ventricle	heart
41	chr11:65960200-65984000	Weak transcription	Fetal Heart	heart
42	chr11:65960400-65965800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr11:65960400-65966000	Strong transcription	Primary neutrophils fromperipheralblood	blood
44	chr11:65960400-65966000	Strong transcription	Monocytes-CD14+_RO01746	blood
45	chr11:65960400-65966400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr11:65960400-65966800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr11:65960400-65967200	Weak transcription	Fetal Intestine Large	intestine
48	chr11:65960400-65967400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr11:65960400-65978000	Weak transcription	Gastric	stomach
50	chr11:65960400-65978000	Weak transcription	HMEC	breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links