Variant report

Variant rs11227413
Chromosome Location chr11:65883696-65883697
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65868600-65893800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr11:65868800-65886200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr11:65875000-65887200 Weak transcription Fetal Muscle Leg muscle
4 chr11:65876800-65888400 Enhancers Primary B cells from peripheral blood blood
5 chr11:65878200-65885600 Enhancers Primary monocytes fromperipheralblood blood
6 chr11:65879200-65886600 Enhancers Fetal Thymus thymus
7 chr11:65879400-65884000 Enhancers HUES6 Cell Line embryonic stem cell
8 chr11:65879400-65884400 Enhancers Small Intestine intestine
9 chr11:65879400-65889400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr11:65879600-65884800 Enhancers Stomach Mucosa stomach
11 chr11:65880000-65884600 Weak transcription Placenta Placenta
12 chr11:65880000-65885800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr11:65880000-65885800 Weak transcription Right Ventricle heart
14 chr11:65880000-65887000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr11:65880200-65885800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:65880200-65885800 Weak transcription Esophagus oesophagus
17 chr11:65880400-65886400 Weak transcription Brain Cingulate Gyrus brain
18 chr11:65880400-65886400 Enhancers Hela-S3 cervix
19 chr11:65880400-65905000 Weak transcription Fetal Stomach stomach
20 chr11:65880600-65886400 Weak transcription Placenta Amnion Placenta Amnion
21 chr11:65880600-65894400 Weak transcription Stomach Smooth Muscle stomach
22 chr11:65881000-65883800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr11:65881000-65884800 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr11:65881000-65886400 Weak transcription H1 Cell Line embryonic stem cell
25 chr11:65881000-65886600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr11:65881000-65886800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr11:65881000-65892000 Weak transcription Brain Anterior Caudate brain
28 chr11:65881000-65894600 Weak transcription Gastric stomach
29 chr11:65881200-65886200 Weak transcription NHLF lung
30 chr11:65881200-65886400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr11:65881200-65886400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr11:65881400-65884000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr11:65881400-65888600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr11:65881600-65885600 Weak transcription NHDF-Ad bronchial
35 chr11:65881600-65885800 Weak transcription HMEC breast
36 chr11:65881600-65886400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:65881600-65886400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr11:65881600-65886400 Weak transcription Fetal Brain Male brain
39 chr11:65881600-65893800 Weak transcription Rectal Smooth Muscle rectum
40 chr11:65882000-65884800 Enhancers Fetal Heart heart
41 chr11:65882000-65885400 Weak transcription NHEK skin
42 chr11:65882200-65884400 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr11:65882200-65884600 Enhancers Fetal Intestine Small intestine
44 chr11:65882400-65884200 Enhancers Fetal Lung lung
45 chr11:65882400-65884400 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr11:65882400-65884600 Flanking Active TSS Primary T cells from cord blood blood
47 chr11:65882400-65884800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr11:65882400-65885000 Enhancers Thymus Thymus
49 chr11:65882800-65883800 Enhancers HUES48 Cell Line embryonic stem cell
50 chr11:65882800-65883800 Flanking Active TSS Primary hematopoietic stem cells blood

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