Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10068960	0.87[YRI][hapmap]
rs11135418	0.91[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs13155160	0.99[ASN][1000 genomes]
rs13156286	0.95[CHB][hapmap];0.90[JPT][hapmap];0.91[ASN][1000 genomes]
rs13160664	0.91[CHB][hapmap];0.96[JPT][hapmap];0.91[ASN][1000 genomes]
rs13181869	0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs1426098	0.82[CHB][hapmap]
rs1426100	0.95[CHB][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]
rs2011547	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2194946	0.83[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2347478	0.95[CHB][hapmap];0.96[JPT][hapmap];0.92[ASN][1000 genomes]
rs2881646	0.82[CHB][hapmap]
rs4869227	0.95[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4869228	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4988879	0.82[CHB][hapmap];0.82[ASN][1000 genomes]
rs6862790	1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs735989	0.87[CHB][hapmap]
rs7728007	0.99[ASN][1000 genomes]
rs7729095	0.95[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7730096	0.87[CHB][hapmap]
rs929989	0.95[CHB][hapmap];0.91[JPT][hapmap];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756469	chr5:94323268-94400017	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94376200-94405800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:94385000-94393200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr5:94385000-94398200	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr5:94385200-94387600	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr5:94385200-94395400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:94385400-94393200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr5:94385600-94404200	Weak transcription	HUVEC	blood vessel
8	chr5:94386200-94387200	Enhancers	Sigmoid Colon	Sigmoid Colon
9	chr5:94386200-94388400	Enhancers	Muscle Satellite Cultured Cells	--
10	chr5:94386600-94395000	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr5:94386800-94393200	Weak transcription	Primary monocytes fromperipheralblood	blood

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