The 2.0 version of rSNPBase

Variant report

Variant rs4887008
Chromosome Location chr15:78378705-78378706
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78370800-78380000 Weak transcription Primary B cells from peripheral blood blood
2 chr15:78370800-78380400 Weak transcription Liver Liver
3 chr15:78374000-78378800 Enhancers Primary monocytes fromperipheralblood blood
4 chr15:78374200-78378800 Enhancers Fetal Muscle Leg muscle
5 chr15:78374600-78379000 Enhancers Adipose Nuclei Adipose
6 chr15:78375400-78383800 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr15:78375600-78379200 Enhancers Fetal Brain Male brain
8 chr15:78375600-78380400 Weak transcription Gastric stomach
9 chr15:78375600-78383800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr15:78375600-78384400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr15:78375800-78380400 Weak transcription Stomach Smooth Muscle stomach
12 chr15:78376200-78379200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr15:78376600-78379000 Enhancers NHDF-Ad bronchial
14 chr15:78376800-78380000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr15:78376800-78384600 Weak transcription Right Atrium heart
16 chr15:78377000-78380000 Weak transcription GM12878-XiMat blood
17 chr15:78377000-78380200 Weak transcription Stomach Mucosa stomach
18 chr15:78377000-78385600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr15:78377200-78380000 Weak transcription Primary B cells from cord blood blood
20 chr15:78377200-78380000 Weak transcription Esophagus oesophagus
21 chr15:78377200-78380400 Weak transcription Colonic Mucosa Colon
22 chr15:78377200-78380600 Weak transcription Fetal Intestine Small intestine
23 chr15:78377200-78380800 Weak transcription Fetal Intestine Large intestine
24 chr15:78377200-78380800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr15:78377200-78384600 Weak transcription Lung lung
26 chr15:78377400-78380200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr15:78377400-78380200 Weak transcription HepG2 liver
28 chr15:78377600-78379000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr15:78377600-78379400 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr15:78377600-78380600 Weak transcription Duodenum Mucosa Duodenum
31 chr15:78377600-78380600 Weak transcription Small Intestine intestine
32 chr15:78377800-78378800 Enhancers Fetal Muscle Trunk muscle
33 chr15:78377800-78379000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr15:78378000-78378800 Enhancers Fetal Lung lung
35 chr15:78378000-78378800 Enhancers NHLF lung
36 chr15:78378000-78379000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
37 chr15:78378000-78379000 Enhancers Osteobl bone
38 chr15:78378000-78380400 Weak transcription Spleen Spleen
39 chr15:78378000-78384600 Weak transcription Placenta Placenta
40 chr15:78378200-78384600 Weak transcription Fetal Thymus thymus
41 chr15:78378400-78378800 Enhancers Monocytes-CD14+_RO01746 blood
42 chr15:78378600-78378800 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015